RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TRPC7Q9HCX4 862 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 SPATA6Q9NWH7 488 aaPredicted RBP14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 RAB20Q9NX57 234 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 GCNT4Q9P109 453 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 ARHGAP26Q9UNA1 814 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 COQ4Q9Y3A0 265 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 MTF2Q9Y483 593 aaPredicted RBP14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 ZNF840PA6NDX5 716 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 SHISA7A6NL88 538 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 SPECC1L-ADORA2AF8WAN1 911 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 CLDN5O00501 218 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 LAMTOR5O43504 91 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 GADD45BO75293 160 aaPredicted RBP14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 CILPO75339 1184 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 AP1G2O75843 785 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 FAM200BP0CF97 657 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 HDCP19113 662 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 CTHP32929 405 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 PMS1P54277 932 aaKnown RBP14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 CACNA2D1P54289 1103 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 USP46P62068 366 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 USP4Q13107 963 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 MORC3Q14149 939 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 PPP2R5DQ14738 602 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 MTF1Q14872 753 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 ZNF77Q15935 545 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 DCAF17Q5H9S7 520 aaPredicted RBP14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 TCERG1LQ5VWI1 586 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 FRMD5Q7Z6J6 570 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 FILIP1Q7Z7B0 1213 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 ALYREFQ86V81 257 aaKnown RBP14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 EEF2KMTQ96G04 330 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 SMG9Q9H0W8 520 aaKnown RBP14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 CHRDQ9H2X0 955 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 FBXO44Q9H4M3 255 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 PNPLA8Q9NP80 782 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 KRT82Q9NSB4 513 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 NDRG2Q9UN36 371 aaKnown RBP14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 CCL26Q9Y258 94 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 ZNF638Q14966 1978 aaKnown RBP14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 F5P12259 2224 aa14.14□□□□□ -0.15
SIRPB3P-201ENST00000340424 ANAPC1Q9H1A4 1944 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 PATJQ8NI35 1801 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 FAM92AA1XBS5 289 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 C2orf78A6NCI8 922 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 PMM2O15305 246 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 LRRN2O75325 713 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 GNA14O95837 355 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 OLFM2O95897 454 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 TUBP50607 506 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 SLC5A3P53794 718 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 SLC7A9P82251 487 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 CETN1Q12798 172 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 TAF10Q12962 218 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 FZD5Q13467 585 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 RUNX3Q13761 415 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 DGKKQ5KSL6 1271 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 SNX30Q5VWJ9 437 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 PAQR9Q6ZVX9 377 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 DDX42Q86XP3 938 aaKnown RBP eCLIP14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 GPIHBP1Q8IV16 184 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 SYNPOQ8N3V7 929 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 ARL14EPQ8N8R7 260 aaPredicted RBP14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 SLC2A14Q8TDB8 520 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 OSCP1Q8WVF1 389 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 ATP2A3Q93084 1043 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 FBXO32Q969P5 355 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 SLC35C1Q96A29 364 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 ZFYVE19Q96K21 471 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 HNRNPABQ99729 332 aaKnown RBP14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 FAM126AQ9BYI3 521 aaPredicted RBP14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 GKN1Q9NS71 199 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 TMEM30AQ9NV96 361 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 FAM86C1Q9NVL1 165 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 GTSE1Q9NYZ3 720 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 IL37Q9NZH6 218 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 HMGXB4Q9UGU5 601 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 COL4A3Q01955 1670 aa14.13□□□□□ -0.15
SIRPB3P-201ENST00000340424 HELZP42694 1942 aaKnown RBP14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 TRIM49BA6NDI0 452 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 TNFRSF10BO14763 440 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 FGFR1OPO95684 399 aaKnown RBP14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 OAS1P00973 400 aaKnown RBP14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 SP9P0CG40 484 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 CCDC130P13994 396 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 IFNAR2P48551 515 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 CCR3P51677 355 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 YWHAEP62258 255 aaKnown RBP14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 PAK1Q13153 545 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 TTI2Q6NXR4 508 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 CPA6Q8N4T0 437 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 NELFBQ8WX92 580 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 SEMA4DQ92854 862 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 NKD2Q969F2 451 aaPredicted RBP14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 ELMO3Q96BJ8 720 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 CYFIP2Q96F07 1278 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 SLC22A12Q96S37 553 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 CYP2S1Q96SQ9 504 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 KCNK16Q96T55 309 aa14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 PRMT8Q9NR22 394 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms