RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ZNF394Q53GI3 561 aa15.49■□□□□ 0.07
ERCC1-203ENST00000340192 TTC16Q8NEE8 873 aa15.49■□□□□ 0.07
ERCC1-203ENST00000340192 ZMIZ2Q8NF64 920 aa15.49■□□□□ 0.07
ERCC1-203ENST00000340192 SCAMP5Q8TAC9 235 aa15.49■□□□□ 0.07
ERCC1-203ENST00000340192 FAM3CQ92520 227 aa15.49■□□□□ 0.07
ERCC1-203ENST00000340192 SLITRK1Q96PX8 696 aa15.49■□□□□ 0.07
ERCC1-203ENST00000340192 PHOX2BQ99453 314 aa15.49■□□□□ 0.07
ERCC1-203ENST00000340192 SMOQ99835 787 aa15.49■□□□□ 0.07
ERCC1-203ENST00000340192 CSNK1G1Q9HCP0 422 aa15.49■□□□□ 0.07
ERCC1-203ENST00000340192 GKN1Q9NS71 199 aa15.49■□□□□ 0.07
ERCC1-203ENST00000340192 CISHQ9NSE2 258 aa15.49■□□□□ 0.07
ERCC1-203ENST00000340192 NDRG2Q9UN36 371 aaKnown RBP15.49■□□□□ 0.07
ERCC1-203ENST00000340192 ABL1P00519 1130 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 FAM200BP0CF97 657 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 SOX9P48436 509 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 FMO5P49326 533 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 PDE6CP51160 858 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 SLC5A3P53794 718 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 MAP3K7CLP57077 242 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 ZNF687Q8N1G0 1237 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 TTC39CQ8N584 583 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 FBXO32Q969P5 355 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 CLDN23Q96B33 292 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 CYFIP2Q96F07 1278 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 HNRNPABQ99729 332 aaKnown RBP15.48■□□□□ 0.07
ERCC1-203ENST00000340192 FAM83CQ9BQN1 747 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 DNAI2Q9GZS0 605 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 CLSTN2Q9H4D0 955 aa15.48■□□□□ 0.07
ERCC1-203ENST00000340192 C8orf33Q9H7E9 229 aaPredicted RBP15.48■□□□□ 0.07
ERCC1-203ENST00000340192 SPECC1L-ADORA2AF8WAN1 911 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 NCAM2O15394 837 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 GNA14O95837 355 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 PFKLP17858 780 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 MAGEA9P43362 315 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 RPS9P46781 194 aaKnown RBP15.47■□□□□ 0.07
ERCC1-203ENST00000340192 USP4Q13107 963 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 FZD5Q13467 585 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 ZNF77Q15935 545 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 ITPRIPL2Q3MIP1 535 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 TRIM68Q6AZZ1 485 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 CC2D1AQ6P1N0 951 aaPredicted RBP15.47■□□□□ 0.07
ERCC1-203ENST00000340192 CLEC20AQ6ZU45 233 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 C1orf210Q8IVY1 113 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 PDZD8Q8NEN9 1154 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 SH3RF2Q8TEC5 729 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 OVCA2Q8WZ82 227 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 MSANTD3Q96H12 275 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 HEXIM2Q96MH2 286 aaKnown RBP15.47■□□□□ 0.07
ERCC1-203ENST00000340192 SRRTQ9BXP5 876 aaKnown RBP15.47■□□□□ 0.07
ERCC1-203ENST00000340192 RNF38Q9H0F5 515 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 EBF3Q9H4W6 596 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 FAM124BQ9H5Z6 455 aaPredicted RBP15.47■□□□□ 0.07
ERCC1-203ENST00000340192 HPS4Q9NQG7 708 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 COMMD8Q9NX08 183 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 IL37Q9NZH6 218 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 RWDD2AQ9UIY3 292 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 ARHGAP26Q9UNA1 814 aa15.47■□□□□ 0.07
ERCC1-203ENST00000340192 PMM2O15305 246 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 OAS1P00973 400 aaKnown RBP15.46■□□□□ 0.07
ERCC1-203ENST00000340192 CTHP32929 405 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 RAD23BP54727 409 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 ZXDBP98169 803 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 LRMPQ12912 555 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 CUL2Q13617 745 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 RUNX3Q13761 415 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 MTF1Q14872 753 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 PPP1R26Q5T8A7 1209 aaPredicted RBP15.46■□□□□ 0.07
ERCC1-203ENST00000340192 RALGPS2Q86X27 583 aaPredicted RBP15.46■□□□□ 0.07
ERCC1-203ENST00000340192 TRIM59Q8IWR1 403 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 SLC4A11Q8NBS3 891 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 JAKMIP2Q96AA8 810 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 TMEM176AQ96HP8 235 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 LMBRD1Q9NUN5 540 aa15.46■□□□□ 0.07
ERCC1-203ENST00000340192 SPATA6Q9NWH7 488 aaPredicted RBP15.46■□□□□ 0.07
ERCC1-203ENST00000340192 CHORDC1Q9UHD1 332 aaPredicted RBP15.46■□□□□ 0.07
ERCC1-203ENST00000340192 CACNA1HO95180 2353 aa15.46■□□□□ 0.06
ERCC1-203ENST00000340192 F5P12259 2224 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 FAM92AA1XBS5 289 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 OTOL1A6NHN0 477 aaPredicted RBP15.45■□□□□ 0.06
ERCC1-203ENST00000340192 HHLA1C9JL84 531 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 OLFM2O95897 454 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 ARSAP15289 507 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 TCF3P15923 654 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 HOXD11P31277 338 aaPredicted RBP15.45■□□□□ 0.06
ERCC1-203ENST00000340192 MARSP56192 900 aaKnown RBP15.45■□□□□ 0.06
ERCC1-203ENST00000340192 SLC7A9P82251 487 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 SNX30Q5VWJ9 437 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 C1orf228Q6PIY5 440 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 TXNDC11Q6PKC3 985 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 GPRIN1Q7Z2K8 1008 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 OSCP1Q8WVF1 389 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 MED15Q96RN5 788 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 FBXO44Q9H4M3 255 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 DUS2Q9NX74 493 aaKnown RBP15.45■□□□□ 0.06
ERCC1-203ENST00000340192 GMIPQ9P107 970 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 WNT6Q9Y6F9 365 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 CACNA1IQ9P0X4 2223 aa15.45■□□□□ 0.06
ERCC1-203ENST00000340192 LEFTY2O00292 366 aa15.44■□□□□ 0.06
ERCC1-203ENST00000340192 P4HA2O15460 535 aa15.44■□□□□ 0.06
ERCC1-203ENST00000340192 COCHO43405 550 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms