RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 MAGEA4P43358 317 aa17.2■□□□□ 0.34
PRDM8-201ENST00000339711 SCUBE3Q8IX30 993 aa17.2■□□□□ 0.34
PRDM8-201ENST00000339711 RAB6BQ9NRW1 208 aa17.2■□□□□ 0.34
PRDM8-201ENST00000339711 GPATCH2LQ9NWQ4 482 aa17.2■□□□□ 0.34
PRDM8-201ENST00000339711 ZC3H4Q9UPT8 1303 aaKnown RBP17.2■□□□□ 0.34
PRDM8-201ENST00000339711 SIGLEC16A6NMB1 481 aa17.2■□□□□ 0.34
PRDM8-201ENST00000339711 TSPAN1O60635 241 aa17.2■□□□□ 0.34
PRDM8-201ENST00000339711 PDHA1P08559 390 aa17.2■□□□□ 0.34
PRDM8-201ENST00000339711 FAM200BP0CF97 657 aa17.2■□□□□ 0.34
PRDM8-201ENST00000339711 UNGP13051 313 aaPredicted RBP17.2■□□□□ 0.34
PRDM8-201ENST00000339711 PAN2Q504Q3 1202 aaKnown RBP17.2■□□□□ 0.34
PRDM8-201ENST00000339711 RAPH1Q70E73 1250 aa17.2■□□□□ 0.34
PRDM8-201ENST00000339711 MON1BQ7L1V2 547 aa17.2■□□□□ 0.34
PRDM8-201ENST00000339711 ZNF572Q7Z3I7 529 aaPredicted RBP17.2■□□□□ 0.34
PRDM8-201ENST00000339711 SEC16BQ96JE7 1060 aa17.2■□□□□ 0.34
PRDM8-201ENST00000339711 STBD1O95210 358 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 MAP3K6O95382 1288 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 AGTP01019 485 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 HOXC6P09630 235 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 CORO7P57737 925 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 TMPRSS15P98073 1019 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 ITKQ08881 620 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 STAT4Q14765 748 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 RWDD4Q6NW29 188 aaKnown RBP17.19■□□□□ 0.34
PRDM8-201ENST00000339711 RNF180Q86T96 592 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 MSL3Q8N5Y2 521 aaKnown RBP17.19■□□□□ 0.34
PRDM8-201ENST00000339711 ATP11CQ8NB49 1132 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 NSMCE1Q8WV22 266 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 FOXP3Q9BZS1 431 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 NXF3Q9H4D5 531 aaKnown RBP17.19■□□□□ 0.34
PRDM8-201ENST00000339711 PCYOX1Q9UHG3 505 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 STXBP5LQ9Y2K9 1186 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 PTPRJQ12913 1337 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 CCDC195A0A1B0GUA6 201 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 DARSP14868 501 aaKnown RBP17.19■□□□□ 0.34
PRDM8-201ENST00000339711 TPD52P55327 224 aaPredicted RBP17.19■□□□□ 0.34
PRDM8-201ENST00000339711 SLC10A6Q3KNW5 377 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 TMEM63BQ5T3F8 832 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 PLEKHA7Q6IQ23 1121 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 ZNF467Q7Z7K2 595 aaPredicted RBP17.19■□□□□ 0.34
PRDM8-201ENST00000339711 RPAINQ86UA6 219 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 CDKL3Q8IVW4 592 aaPredicted RBP17.19■□□□□ 0.34
PRDM8-201ENST00000339711 LRRC37BQ96QE4 947 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 XPO6Q96QU8 1125 aaKnown RBP17.19■□□□□ 0.34
PRDM8-201ENST00000339711 COL4A5P29400 1685 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 FSCN2O14926 492 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 URGCPQ8TCY9 931 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 SLC24A3Q9HC58 644 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 XPNPEP3Q9NQH7 507 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 FNDC3AQ9Y2H6 1198 aaKnown RBP17.19■□□□□ 0.34
PRDM8-201ENST00000339711 SLC45A1Q9Y2W3 748 aa17.19■□□□□ 0.34
PRDM8-201ENST00000339711 CFAP69A5D8W1 941 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 H3BRJ5 948 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 CDH16O75309 829 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 SYF2O95926 243 aaKnown RBP17.18■□□□□ 0.34
PRDM8-201ENST00000339711 CYP1A1P04798 512 aaPredicted RBP17.18■□□□□ 0.34
PRDM8-201ENST00000339711 MIPP30301 263 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 PTGISQ16647 500 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 CDCA2Q69YH5 1023 aaPredicted RBP17.18■□□□□ 0.34
PRDM8-201ENST00000339711 CPNE8Q86YQ8 564 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 C12orf29Q8N999 325 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 CDKL2Q92772 493 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 TMBIM4Q9HC24 238 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 SMIM35A0A1B0GVV1 85 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 TMEM191CA6NGB0 347 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 TREHO43280 583 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 APRTP07741 180 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 SETSIPP0DME0 302 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 NCF2P19878 526 aaPredicted RBP17.18■□□□□ 0.34
PRDM8-201ENST00000339711 ACAT1P24752 427 aaKnown RBP17.18■□□□□ 0.34
PRDM8-201ENST00000339711 GLB1LQ6UWU2 654 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 TFAP2BQ92481 460 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 TXLNGQ9NUQ3 528 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 DNPEPQ9ULA0 475 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 TCRBV7S2A1N4TA0A589 114 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 MTA2O94776 668 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 GHRP10912 638 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 BST2Q10589 180 aaKnown RBP17.18■□□□□ 0.34
PRDM8-201ENST00000339711 PTPN20Q4JDL3 420 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 DUPD1Q68J44 220 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 PARP9Q8IXQ6 854 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 MYCBPAPQ8TBZ2 947 aa17.18■□□□□ 0.34
PRDM8-201ENST00000339711 CDC42EP4Q9H3Q1 356 aaKnown RBP17.18■□□□□ 0.34
PRDM8-201ENST00000339711 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.18■□□□□ 0.34
PRDM8-201ENST00000339711 KLHL8Q9P2G9 620 aaPredicted RBP17.18■□□□□ 0.34
PRDM8-201ENST00000339711 TIMM13Q9Y5L4 95 aaPredicted RBP17.18■□□□□ 0.34
PRDM8-201ENST00000339711 SNAI1O95863 264 aaPredicted RBP17.17■□□□□ 0.34
PRDM8-201ENST00000339711 DEUP1Q05D60 604 aa17.17■□□□□ 0.34
PRDM8-201ENST00000339711 POU5F1BQ06416 359 aa17.17■□□□□ 0.34
PRDM8-201ENST00000339711 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
PRDM8-201ENST00000339711 ECT2Q9H8V3 914 aa17.17■□□□□ 0.34
PRDM8-201ENST00000339711 NRXN2Q9P2S2 1712 aa17.17■□□□□ 0.34
PRDM8-201ENST00000339711 DNAJC25-GNG10A0A024R161 153 aa17.17■□□□□ 0.34
PRDM8-201ENST00000339711 CFLARO15519 480 aa17.17■□□□□ 0.34
PRDM8-201ENST00000339711 ALDH1A1P00352 501 aa17.17■□□□□ 0.34
PRDM8-201ENST00000339711 GJA5P36382 358 aa17.17■□□□□ 0.34
PRDM8-201ENST00000339711 AP1B1Q10567 949 aa17.17■□□□□ 0.34
PRDM8-201ENST00000339711 PCBP1Q15365 356 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRDM8-201ENST00000339711 NPLOC4Q8TAT6 608 aa17.17■□□□□ 0.34
PRDM8-201ENST00000339711 GAD1Q99259 594 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms