RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 ZNF667Q5HYK9 610 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 C12orf56Q8IXR9 622 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 NUP93Q8N1F7 819 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 RPLP0P6Q8NHW5 317 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 GAB3Q8WWW8 586 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 ZNF516Q92618 1163 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 CCDC47Q96A33 483 aaKnown RBP11.35□□□□□ -0.59
CAPN3-202ENST00000337571 CHFRQ96EP1 664 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 TNIP3Q96KP6 325 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 MED10Q9BTT4 135 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 FBRSL1Q9HCM7 1045 aaKnown RBP11.35□□□□□ -0.59
CAPN3-202ENST00000337571 PARD6AQ9NPB6 346 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 EXOC1Q9NV70 894 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 C2orf42Q9NWW7 574 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 SERTAD1Q9UHV2 236 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 RCOR1Q9UKL0 485 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 OTOGLQ3ZCN5 2332 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 MED19A0JLT2 244 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-202ENST00000337571 ZNF840PA6NDX5 716 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 LEFTY2O00292 366 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 AKAP3O75969 853 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 RTN3O95197 1032 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-202ENST00000337571 KIF20AO95235 890 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 TCF3P15923 654 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 USP46P62068 366 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 DNM1Q05193 864 aaKnown RBP11.34□□□□□ -0.59
CAPN3-202ENST00000337571 EHHADHQ08426 723 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 TAF10Q12962 218 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 NCOA4Q13772 614 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 SGSM1Q2NKQ1 1148 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 ZNF699Q32M78 642 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 PRR23CQ6ZRP0 262 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 SYT13Q7L8C5 426 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 C12orf50Q8NA57 414 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-202ENST00000337571 B3GALNT2Q8NCR0 500 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 PDZD8Q8NEN9 1154 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 RIN3Q8TB24 985 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 NETO1Q8TDF5 533 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 ACDQ96AP0 544 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 PAGE5Q96GU1 130 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 LOXL4Q96JB6 756 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 TTLL2Q9BWV7 592 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 LINC00597Q9H2U6 94 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 USP25Q9UHP3 1055 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.34□□□□□ -0.59
CAPN3-202ENST00000337571 ATG2BQ96BY7 2078 aa11.34□□□□□ -0.59
CAPN3-202ENST00000337571 DCDC2BA2VCK2 349 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 APBB3O95704 486 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 MYL1P05976 194 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 MBL2P11226 248 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-202ENST00000337571 YWHAQP27348 245 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 CASP4P49662 377 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 SLC7A9P82251 487 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 STK4Q13043 487 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 USP4Q13107 963 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 PKN3Q6P5Z2 889 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 DDX42Q86XP3 938 aaKnown RBP eCLIP11.33□□□□□ -0.6
CAPN3-202ENST00000337571 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 KIAA1958Q8N8K9 716 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 PARD3BQ8TEW8 1205 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 SPATA32Q96LK8 384 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 B3GNT5Q9BYG0 378 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 ZNF518BQ9C0D4 1074 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 DNAI2Q9GZS0 605 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 NACA2Q9H009 215 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 RNF38Q9H0F5 515 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 ARRDC1-AS1Q9H2J1 176 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 DPEP3Q9H4B8 488 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 SMPD4Q9NXE4 827 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 CHORDC1Q9UHD1 332 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-202ENST00000337571 FRMD4BQ9Y2L6 1034 aa11.33□□□□□ -0.6
CAPN3-202ENST00000337571 HELZP42694 1942 aaKnown RBP11.33□□□□□ -0.6
CAPN3-202ENST00000337571 A0A1B0GVL5 298 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 CLDN5O00501 218 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 PDXKO00764 312 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 CALUO43852 315 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-202ENST00000337571 RHOBTB1O94844 696 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 RPN1P04843 607 aaKnown RBP11.32□□□□□ -0.6
CAPN3-202ENST00000337571 CMA1P23946 247 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 CDH8P55286 799 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 DMC1Q14565 340 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 ELF2Q15723 593 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 KMT5BQ4FZB7 885 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-202ENST00000337571 C2orf27AQ580R0 203 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 CEP135Q66GS9 1140 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 IL31Q6EBC2 164 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 FILIP1Q7Z7B0 1213 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 KBTBD6Q86V97 674 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 SLC9A9Q8IVB4 645 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 ADGRG2Q8IZP9 1017 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 OVCA2Q8WZ82 227 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 DDX1Q92499 740 aaKnown RBP11.32□□□□□ -0.6
CAPN3-202ENST00000337571 TAF4BQ92750 862 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 FBXO32Q969P5 355 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 SMARCD1Q96GM5 515 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 HHIPQ96QV1 700 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 KCNK16Q96T55 309 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 XYLT2Q9H1B5 865 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 VRTNQ9H8Y1 702 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms