RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 MRE11P49959 708 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 SLC5A3P53794 718 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 MLLT6P55198 1093 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-203ENST00000336520 STX17P56962 302 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 PAK1Q13153 545 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 MTF1Q14872 753 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 PDGFRLQ15198 375 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 ZNF394Q53GI3 561 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 PAQR9Q6ZVX9 377 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 FRMD5Q7Z6J6 570 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 FILIP1Q7Z7B0 1213 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 RALGPS2Q86X27 583 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-203ENST00000336520 TRIML1Q8N9V2 468 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 PDZD8Q8NEN9 1154 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 SH3RF2Q8TEC5 729 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 SLC35C1Q96A29 364 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 JAKMIP2Q96AA8 810 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 DUSP9Q99956 384 aaKnown RBP12.03□□□□□ -0.48
MRPL55-203ENST00000336520 EBF3Q9H4W6 596 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 GCNT4Q9P109 453 aa12.03□□□□□ -0.48
MRPL55-203ENST00000336520 SHISA7A6NL88 538 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 ARSAP15289 507 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 RPS9P46781 194 aaKnown RBP12.02□□□□□ -0.49
MRPL55-203ENST00000336520 IFNAR2P48551 515 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 MAP3K7CLP57077 242 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 YWHAEP62258 255 aaKnown RBP12.02□□□□□ -0.49
MRPL55-203ENST00000336520 USP4Q13107 963 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 RUNX3Q13761 415 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 LRRC32Q14392 662 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 ZNF77Q15935 545 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 TRIM68Q6AZZ1 485 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 SCAMP5Q8TAC9 235 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 RIN3Q8TB24 985 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 TATDN2Q93075 761 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 CLDN23Q96B33 292 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 CYFIP2Q96F07 1278 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 FAXDC2Q96IV6 333 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 HEXIM2Q96MH2 286 aaKnown RBP12.02□□□□□ -0.49
MRPL55-203ENST00000336520 HNRNPABQ99729 332 aaKnown RBP12.02□□□□□ -0.49
MRPL55-203ENST00000336520 SMOQ99835 787 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 ARID3AQ99856 593 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 FAM83CQ9BQN1 747 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 CISHQ9NSE2 258 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 DUS2Q9NX74 493 aaKnown RBP12.02□□□□□ -0.49
MRPL55-203ENST00000336520 SMPD4Q9NXE4 827 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 ARHGAP26Q9UNA1 814 aa12.02□□□□□ -0.49
MRPL55-203ENST00000336520 FGFR1OPO95684 399 aaKnown RBP12.01□□□□□ -0.49
MRPL55-203ENST00000336520 GNA14O95837 355 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 NBL1P41271 181 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 FMO5P49326 533 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 CETN1Q12798 172 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 LRMPQ12912 555 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 CUL2Q13617 745 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 FOXR2Q6PJQ5 311 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 TXNDC11Q6PKC3 985 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 CPA6Q8N4T0 437 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 ZMIZ2Q8NF64 920 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 WHAMMQ8TF30 809 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 OVCA2Q8WZ82 227 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 ATP2A3Q93084 1043 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 NACA2Q9H009 215 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 CHRDQ9H2X0 955 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 FBXO44Q9H4M3 255 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 LMAN1LQ9HAT1 526 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 CSNK1G1Q9HCP0 422 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 HPS4Q9NQG7 708 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 COMMD8Q9NX08 183 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 GMIPQ9P107 970 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 CHORDC1Q9UHD1 332 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-203ENST00000336520 COQ4Q9Y3A0 265 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 CPQQ9Y646 472 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 WNT6Q9Y6F9 365 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 ANAPC1Q9H1A4 1944 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 MYH10P35580 1976 aa12.01□□□□□ -0.49
MRPL55-203ENST00000336520 KIF26AQ9ULI4 1882 aaPredicted RBP12□□□□□ -0.49
MRPL55-203ENST00000336520 LEFTY2O00292 366 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 TNFRSF10BO14763 440 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 BEST1O76090 585 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 OAS1P00973 400 aaKnown RBP12□□□□□ -0.49
MRPL55-203ENST00000336520 SP9P0CG40 484 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 MBL2P11226 248 aaPredicted RBP12□□□□□ -0.49
MRPL55-203ENST00000336520 SLC7A9P82251 487 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 AMPD2Q01433 879 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 CSTF1Q05048 431 aaKnown RBP12□□□□□ -0.49
MRPL55-203ENST00000336520 MTAPQ13126 283 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 FZD5Q13467 585 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 PON2Q15165 354 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 HECTD3Q5T447 861 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 ZC3H14Q6PJT7 736 aaKnown RBP12□□□□□ -0.49
MRPL55-203ENST00000336520 CLEC20AQ6ZU45 233 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 DDX42Q86XP3 938 aaKnown RBP eCLIP12□□□□□ -0.49
MRPL55-203ENST00000336520 ZNF687Q8N1G0 1237 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 SLC4A11Q8NBS3 891 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 OSCP1Q8WVF1 389 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 TMEM176AQ96HP8 235 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 NT5C1BQ96P26 610 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 IER2Q9BTL4 223 aa12□□□□□ -0.49
MRPL55-203ENST00000336520 SRRTQ9BXP5 876 aaKnown RBP12□□□□□ -0.49
MRPL55-203ENST00000336520 RNF38Q9H0F5 515 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms