RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 DMAP1Q9NPF5 467 aaPredicted RBP14.53□□□□□ -0.08
SF1-202ENST00000334944 CPSF3Q9UKF6 684 aaKnown RBP14.53□□□□□ -0.08
SF1-202ENST00000334944 WASF2Q9Y6W5 498 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 TMEM191CA6NGB0 347 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 ABLIM1O14639 778 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 VTNP04004 478 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 ASPAP45381 313 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 PTK6Q13882 451 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 IER5Q5VY09 327 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 LRRC37BQ96QE4 947 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 MMP19Q99542 508 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 SMYD3Q9H7B4 428 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 SUDS3Q9H7L9 328 aaPredicted RBP14.53□□□□□ -0.08
SF1-202ENST00000334944 NINJ2Q9NZG7 142 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 RNF181Q9P0P0 153 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 WHRNQ9P202 907 aa14.53□□□□□ -0.08
SF1-202ENST00000334944 GPR25O00155 361 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 ZNF286BP0CG31 522 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 ITIH2P19823 946 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 VHLP40337 213 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 ZNF132P52740 706 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 GAD2Q05329 585 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.08
SF1-202ENST00000334944 KPNB1Q14974 876 aaKnown RBP14.52□□□□□ -0.08
SF1-202ENST00000334944 TAF5Q15542 800 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 ZPBP2Q6X784 338 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 XYLT2Q9H1B5 865 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 ATXN10Q9UBB4 475 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 SCINQ9Y6U3 715 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 SIGLEC16A6NMB1 481 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 TTC4O95801 387 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 SKIP12755 728 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 EFNA5P52803 228 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 PTPN20Q4JDL3 420 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 RAB6CQ53S08 254 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 TRIM72Q6ZMU5 477 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 CEP128Q6ZU80 1094 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 KATNAL2Q8IYT4 538 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 SLITRK1Q96PX8 696 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 TRAPPC9Q96Q05 1148 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 TUBGCP5Q96RT8 1024 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 RAB6CQ9H0N0 254 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 SDCBP2Q9H190 292 aa14.52□□□□□ -0.08
SF1-202ENST00000334944 PAPPA2Q9BXP8 1791 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 PSTPIP1O43586 416 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 TBX10O75333 385 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 ITGB3P05106 788 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 CD48P09326 243 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 GPS1Q13098 491 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 KIAA0319LQ8IZA0 1049 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 AGGF1Q8N302 714 aaeCLIP14.52□□□□□ -0.09
SF1-202ENST00000334944 TMEM35BQ8NCS4 154 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 CDT1Q9H211 546 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 SYNCQ9H7C4 482 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 ZNF408Q9H9D4 720 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 IP6K2Q9UHH9 426 aa14.52□□□□□ -0.09
SF1-202ENST00000334944 A0A087WZ62 844 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 ARSEP51690 589 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 EXD1Q8NHP7 514 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 NMD3Q96D46 503 aaKnown RBP14.51□□□□□ -0.09
SF1-202ENST00000334944 ANKRD27Q96NW4 1050 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 RBM15Q96T37 977 aaKnown RBP eCLIP14.51□□□□□ -0.094e-9■□□□□ 10.2
SF1-202ENST00000334944 MIPEPQ99797 713 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 FDXACB1Q9BRP7 624 aaPredicted RBP14.51□□□□□ -0.09
SF1-202ENST00000334944 TRAIPQ9BWF2 469 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 STOML1Q9UBI4 398 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 CNTN6Q9UQ52 1028 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 A0A0G2JLL6 359 aaPredicted RBP14.51□□□□□ -0.09
SF1-202ENST00000334944 GRAP2O75791 330 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 TAC1P20366 129 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 IL1R2P27930 398 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 CCNG2Q16589 344 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 TAF1BQ53T94 588 aaPredicted RBP14.51□□□□□ -0.09
SF1-202ENST00000334944 ACSBG2Q5FVE4 666 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 MPZL3Q6UWV2 235 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 PRRT2Q7Z6L0 340 aaPredicted RBP14.51□□□□□ -0.09
SF1-202ENST00000334944 ENDOVQ8N8Q3 282 aaKnown RBP14.51□□□□□ -0.09
SF1-202ENST00000334944 UBA3Q8TBC4 463 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 LRRN4Q8WUT4 740 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 PTPRN2Q92932 1015 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 CPXM1Q96SM3 734 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 CXCL16Q9H2A7 254 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 SAYSD1Q9NPB0 183 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 SIX4Q9UIU6 781 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 NUMBLQ9Y6R0 609 aa14.51□□□□□ -0.09
SF1-202ENST00000334944 SGK1O00141 431 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 TNNC2P02585 160 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 TGFB3P10600 412 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 YY1P25490 414 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 PSMA2P25787 234 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 IREB2P48200 963 aaKnown RBP14.5□□□□□ -0.09
SF1-202ENST00000334944 MTA1Q13330 715 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 MXD4Q14582 209 aaPredicted RBP14.5□□□□□ -0.09
SF1-202ENST00000334944 PARP6Q2NL67 630 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 SPOCD1Q6ZMY3 1216 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 UBR7Q8N806 425 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 GRK7Q8WTQ7 553 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 RUNDC3BQ96NL0 473 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 DCLRE1BQ9H816 532 aa14.5□□□□□ -0.09
SF1-202ENST00000334944 RMI1Q9H9A7 625 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms