RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 C18orf8Q96DM3 657 aa22.68■■□□□ 1.22
TPM1-204ENST00000334895 CYLDQ9NQC7 956 aa22.68■■□□□ 1.22
TPM1-204ENST00000334895 CNOT8Q9UFF9 292 aaKnown RBP22.68■■□□□ 1.22
TPM1-204ENST00000334895 NCANO14594 1321 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 RFXAPO00287 272 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 PAPSS1O43252 624 aaPredicted RBP22.67■■□□□ 1.22
TPM1-204ENST00000334895 LPXNO60711 386 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 CYP1A2P05177 515 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 GRIN2CQ14957 1233 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 DDR2Q16832 855 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 RAB41Q5JT25 222 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 LILRA6Q6PI73 481 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 DEFB123Q8N688 67 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 MICAL1Q8TDZ2 1067 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 C8orf48Q96LL4 319 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 SEPT5Q99719 369 aaPredicted RBP22.67■■□□□ 1.22
TPM1-204ENST00000334895 EMILIN2Q9BXX0 1053 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 PNPLA8Q9NP80 782 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 LZTFL1Q9NQ48 299 aa22.67■■□□□ 1.22
TPM1-204ENST00000334895 TNFRSF10BO14763 440 aa22.66■■□□□ 1.22
TPM1-204ENST00000334895 TGM5O43548 720 aa22.66■■□□□ 1.22
TPM1-204ENST00000334895 ADH1AP07327 375 aa22.66■■□□□ 1.22
TPM1-204ENST00000334895 MYBL1P10243 752 aa22.66■■□□□ 1.22
TPM1-204ENST00000334895 GSCP56915 257 aaPredicted RBP22.66■■□□□ 1.22
TPM1-204ENST00000334895 ADIGQ0VDE8 80 aa22.66■■□□□ 1.22
TPM1-204ENST00000334895 MGAT5BQ3V5L5 792 aa22.66■■□□□ 1.22
TPM1-204ENST00000334895 STKLD1Q8NE28 680 aa22.66■■□□□ 1.22
TPM1-204ENST00000334895 IPO4Q8TEX9 1081 aaKnown RBP22.66■■□□□ 1.22
TPM1-204ENST00000334895 TRIM11Q96F44 468 aa22.66■■□□□ 1.22
TPM1-204ENST00000334895 PIWIL1Q96J94 861 aaKnown RBP22.66■■□□□ 1.22
TPM1-204ENST00000334895 SYNCQ9H7C4 482 aa22.66■■□□□ 1.22
TPM1-204ENST00000334895 AVENQ9NQS1 362 aaPredicted RBP22.66■■□□□ 1.22
TPM1-204ENST00000334895 MYO1AQ9UBC5 1043 aa22.66■■□□□ 1.22
TPM1-204ENST00000334895 TRIM66O15016 1216 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 GJB6O95452 261 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 LCP1P13796 627 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 ATF6P18850 670 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 KIF5AQ12840 1032 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 PLEKHA7Q6IQ23 1121 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 FAM183BPQ6ZVS7 135 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 SCUBE3Q8IX30 993 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 MSANTD4Q8NCY6 345 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 CLEC4CQ8WTT0 213 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 LMAN2LQ9H0V9 348 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 PRDM12Q9H4Q4 367 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 HSFX1Q9UBD0 423 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 STRIP2Q9ULQ0 834 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 COG5Q9UP83 839 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 GREB1Q4ZG55 1949 aa22.65■■□□□ 1.22
TPM1-204ENST00000334895 BTNL10A8MVZ5 291 aa22.64■■□□□ 1.22
TPM1-204ENST00000334895 SPATA31D3P0C874 917 aa22.64■■□□□ 1.22
TPM1-204ENST00000334895 ACADSBP45954 432 aa22.64■■□□□ 1.22
TPM1-204ENST00000334895 PDE12Q6L8Q7 609 aaKnown RBP22.64■■□□□ 1.22
TPM1-204ENST00000334895 SPATA31D4Q6ZUB0 917 aa22.64■■□□□ 1.22
TPM1-204ENST00000334895 GPR152Q8TDT2 470 aa22.64■■□□□ 1.22
TPM1-204ENST00000334895 RFFLQ8WZ73 363 aa22.64■■□□□ 1.22
TPM1-204ENST00000334895 MCRS1Q96EZ8 462 aa22.64■■□□□ 1.22
TPM1-204ENST00000334895 CYP4F11Q9HBI6 524 aa22.64■■□□□ 1.22
TPM1-204ENST00000334895 LRRC4Q9HBW1 653 aa22.64■■□□□ 1.22
TPM1-204ENST00000334895 KLRC2P26717 231 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 TKTL1P51854 596 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 SLC5A3P53794 718 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 MAMLD1Q13495 774 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 ZNF268Q14587 947 aaPredicted RBP22.64■■□□□ 1.21
TPM1-204ENST00000334895 TCEAL1Q15170 157 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 LIN9Q5TKA1 542 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 OLFML1Q6UWY5 402 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 TCEAL8Q8IYN2 117 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 TXLNBQ8N3L3 684 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 C3orf20Q8ND61 904 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 SCAMP5Q8TAC9 235 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 MIS12Q9H081 205 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 OSGEPQ9NPF4 335 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 FBXW11Q9UKB1 542 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 YIPF1Q9Y548 306 aa22.64■■□□□ 1.21
TPM1-204ENST00000334895 A0A0A6YYK5 440 aaPredicted RBP22.63■■□□□ 1.21
TPM1-204ENST00000334895 GOLGA8SH3BPF8 625 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 CLCN4P51793 760 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 ARHGAP29Q52LW3 1261 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 PPP1R15BQ5SWA1 713 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 OR6B2Q6IFH4 312 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 ADGRD2Q7Z7M1 963 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 SLC35G2Q8TBE7 412 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 NDRG1Q92597 394 aaKnown RBP22.63■■□□□ 1.21
TPM1-204ENST00000334895 NUP85Q9BW27 656 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 ULBP1Q9BZM6 244 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 TSGA10Q9BZW7 698 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 MAFFQ9ULX9 164 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 GUCA1BQ9UMX6 200 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 PAXBP1Q9Y5B6 917 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 USP3Q9Y6I4 520 aa22.63■■□□□ 1.21
TPM1-204ENST00000334895 MACROD2A1Z1Q3 448 aa22.62■■□□□ 1.21
TPM1-204ENST00000334895 CCP110O43303 1012 aa22.62■■□□□ 1.21
TPM1-204ENST00000334895 KRT86O43790 486 aa22.62■■□□□ 1.21
TPM1-204ENST00000334895 CLASP2O75122 1294 aaKnown RBP22.62■■□□□ 1.21
TPM1-204ENST00000334895 TUFMP49411 452 aaKnown RBP22.62■■□□□ 1.21
TPM1-204ENST00000334895 USP46P62068 366 aa22.62■■□□□ 1.21
TPM1-204ENST00000334895 BHLHA9Q7RTU4 235 aa22.62■■□□□ 1.21
TPM1-204ENST00000334895 SIX6OS1Q8N1H7 587 aa22.62■■□□□ 1.21
TPM1-204ENST00000334895 KHSRPQ92945 711 aaKnown RBP eCLIP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms