RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ZNF341Q9BYN7 854 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 THAP2Q9H0W7 228 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 GPRC5DQ9NZD1 345 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 VWA5AO00534 786 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 ATG7O95352 703 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 PSMG1O95456 288 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 SFNP31947 248 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 GLRBP48167 497 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 TAF5Q15542 800 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 TAB1Q15750 504 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 ATP6AP1LQ52LC2 224 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 RNF19BQ6ZMZ0 732 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 IKBIPQ70UQ0 350 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 ADGRF4Q8IZF3 695 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 EFHBQ8N7U6 833 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 KYQ8NBH2 561 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 COMMD8Q9NX08 183 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 TJP2Q9UDY2 1190 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 DUSP10Q9Y6W6 482 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 ASMTLO95671 621 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 CHRM3P20309 590 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 PURAQ00577 322 aaKnown RBP10.14□□□□□ -0.79
COL4A6-201ENST00000334504 XRCC4Q13426 336 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 DDI2Q5TDH0 399 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 RIPOR1Q6ZS17 1223 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 UTP15Q8TED0 518 aaKnown RBP10.14□□□□□ -0.79
COL4A6-201ENST00000334504 CNKSR1Q969H4 720 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 VPS33AQ96AX1 596 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 KIFC1Q9BW19 673 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 DGCR6LQ9BY27 220 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 KRCC1Q9NPI7 259 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-201ENST00000334504 ZBTB1Q9Y2K1 713 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 WDR62O43379 1518 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 UBXN8O00124 270 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 PTGER2P43116 358 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 CRKLP46109 303 aaKnown RBP10.14□□□□□ -0.79
COL4A6-201ENST00000334504 RGS4P49798 205 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 CHN2P52757 468 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 ABATP80404 500 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 PDK1Q15118 436 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 KLHDC7AQ5VTJ3 777 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 AGAP9Q5VTM2 703 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 TMEM179Q6ZVK1 233 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 ZNF554Q86TJ5 538 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 LENG1Q96BZ8 264 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-201ENST00000334504 PABPC5Q96DU9 382 aaKnown RBP10.14□□□□□ -0.79
COL4A6-201ENST00000334504 CYP4F12Q9HCS2 524 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 EHD3Q9NZN3 535 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 RNF112Q9ULX5 631 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 GMEB1Q9Y692 573 aa10.14□□□□□ -0.79
COL4A6-201ENST00000334504 NCF1BA6NI72 391 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 NCF1CA8MVU1 366 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 PTGES3LE9PB15 166 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 NCF1P14598 390 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 AGKQ53H12 422 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 CACTIN-AS1Q8N1I8 211 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 OXNAD1Q96HP4 312 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 SMARCAD1Q9H4L7 1026 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 RRN3Q9NYV6 651 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 A0A087WXM4 84 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 TM9SF1O15321 606 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 CPSF4O95639 269 aaKnown RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 JAK1P23458 1154 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 RPL10AP62906 217 aaKnown RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 ZRANB3Q5FWF4 1079 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 FAM117BQ6P1L5 589 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 C4orf22Q6V702 233 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 DENND5BQ6ZUT9 1274 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 SLC44A2Q8IWA5 706 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 UNC45BQ8IWX7 931 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 ZSCAN18Q8TBC5 510 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 FEZF2Q8TBJ5 459 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 SCFD2Q8WU76 684 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 SYN2Q92777 582 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 REEP2Q9BRK0 252 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 TRIM62Q9BVG3 475 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 RNF181Q9P0P0 153 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 BTBD3Q9Y2F9 522 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 FCHO1O14526 889 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 BAIAP3O94812 1187 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 GH2P01242 217 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 YWHABP31946 246 aaKnown RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 HERVK_113P62684 666 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 RAD51Q06609 339 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 MTFR1Q15390 333 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 WDR72Q3MJ13 1102 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 PAPD7Q5XG87 772 aaKnown RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 C10orf53Q8N6V4 93 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 C1orf131Q8NDD1 294 aaKnown RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 AGAP11Q8TF27 550 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 COPS7BQ9H9Q2 264 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 PLGRKTQ9HBL7 147 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 WWOXQ9NZC7 414 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 STON1Q9Y6Q2 735 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 SMIM31A0A1B0GVY4 71 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 MYMKA6NI61 221 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 PPP1R3GB7ZBB8 358 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms