RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 RSAD1Q9HA92 442 aa9.4□□□□□ -0.9
TREM1-202ENST00000334475 AAASQ9NRG9 546 aa9.4□□□□□ -0.9
TREM1-202ENST00000334475 METTL5Q9NRN9 209 aaKnown RBP9.4□□□□□ -0.9
TREM1-202ENST00000334475 SETD4Q9NVD3 440 aa9.4□□□□□ -0.9
TREM1-202ENST00000334475 CYTH4Q9UIA0 394 aa9.4□□□□□ -0.9
TREM1-202ENST00000334475 GGA2Q9UJY4 613 aa9.4□□□□□ -0.9
TREM1-202ENST00000334475 TSPAN16Q9UKR8 245 aa9.4□□□□□ -0.9
TREM1-202ENST00000334475 SHOC2Q9UQ13 582 aa9.4□□□□□ -0.9
TREM1-202ENST00000334475 R3HDM2Q9Y2K5 976 aaKnown RBP9.4□□□□□ -0.9
TREM1-202ENST00000334475 SCN1AP35498 2009 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 GOLGA8SH3BPF8 625 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 RASGRF2O14827 1237 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 TP73O15350 636 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 CAND2O75155 1236 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 ENDOD1O94919 500 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 TTC4O95801 387 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 KCNE1P15382 129 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 KDELR1P24390 212 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 HOXA11P31270 313 aaPredicted RBP9.39□□□□□ -0.91
TREM1-202ENST00000334475 HOXC8P31273 242 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 HPDP32754 393 aaPredicted RBP9.39□□□□□ -0.91
TREM1-202ENST00000334475 MMP13P45452 471 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 ZNF143P52747 638 aaPredicted RBP9.39□□□□□ -0.91
TREM1-202ENST00000334475 MAGOHP61326 146 aaKnown RBP9.39□□□□□ -0.91
TREM1-202ENST00000334475 TFDP2Q14188 446 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 STAT4Q14765 748 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 ARHGEF6Q15052 776 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 PKDCCQ504Y2 493 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 ALKAL1Q6UXT8 129 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 MICALCLQ6ZW33 695 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 ARCQ7LC44 396 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 GSTA5Q7RTV2 222 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 ZCCHC9Q8N567 271 aaKnown RBP9.39□□□□□ -0.91
TREM1-202ENST00000334475 ZNF454Q8N9F8 522 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 CMASQ8NFW8 434 aaPredicted RBP9.39□□□□□ -0.91
TREM1-202ENST00000334475 JOSD2Q8TAC2 188 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 TEKT4Q8WW24 435 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 RNF166Q96A37 237 aaPredicted RBP9.39□□□□□ -0.91
TREM1-202ENST00000334475 ZBTB9Q96C00 473 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 PPP1R16BQ96T49 567 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 TBCBQ99426 244 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 APBA2Q99767 749 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 CCDC77Q9BR77 488 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 SLC4A5Q9BY07 1137 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 TRIM6Q9C030 488 aaPredicted RBP9.39□□□□□ -0.91
TREM1-202ENST00000334475 SNTG2Q9NY99 539 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 BCCIPQ9P287 314 aaKnown RBP eCLIP9.39□□□□□ -0.91
TREM1-202ENST00000334475 HESX1Q9UBX0 185 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 GJD2Q9UKL4 321 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 TPX2Q9ULW0 747 aaKnown RBP9.39□□□□□ -0.91
TREM1-202ENST00000334475 ZNF148Q9UQR1 794 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 DNAH12Q6ZR08 3092 aa9.39□□□□□ -0.91
TREM1-202ENST00000334475 CDH23Q9H251 3354 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 CUL9Q8IWT3 2517 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 C17orf102A2RUQ5 167 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 C3orf70A6NLC5 250 aaPredicted RBP9.38□□□□□ -0.91
TREM1-202ENST00000334475 C2CD4BA6NLJ0 364 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 APOC4-APOC2K7ER74 178 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 NDUFAB1O14561 156 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 ADCY6O43306 1168 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 CSDE1O75534 798 aaKnown RBP9.38□□□□□ -0.91
TREM1-202ENST00000334475 RECQL4O94761 1208 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 TRUB2O95900 331 aaKnown RBP9.38□□□□□ -0.91
TREM1-202ENST00000334475 FAM107AO95990 144 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 IGHA2P01877 340 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 APOC2P02655 101 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 SHBGP04278 402 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 TSHRP16473 764 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 FGFR4P22455 802 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 CRYBB1P53674 252 aaPredicted RBP9.38□□□□□ -0.91
TREM1-202ENST00000334475 GUCY1A3Q02108 690 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 NR1H3Q13133 447 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 SNX17Q15036 470 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 PDK2Q15119 407 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 KIZQ2M2Z5 673 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 GOLGA7BQ2TAP0 167 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 SV2CQ496J9 727 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 BOLA3Q53S33 107 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 FAM47CQ5HY64 1035 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 FAM102AQ5T9C2 384 aaPredicted RBP9.38□□□□□ -0.91
TREM1-202ENST00000334475 DAB2IPQ5VWQ8 1189 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 C9orf57Q5W0N0 161 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 TAF2Q6P1X5 1199 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 DPH6Q7L8W6 267 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 SRLQ86TD4 932 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 TMEM110Q86TL2 294 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 SESTD1Q86VW0 696 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 NLRP14Q86W24 1093 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 CCDC25Q86WR0 208 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 MAP7D3Q8IWC1 876 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 C7orf61Q8IZ16 206 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 RAPGEF5Q92565 580 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 CFAP57Q96MR6 1250 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 OSMRQ99650 979 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
TREM1-202ENST00000334475 FAM49AQ9H0Q0 323 aaPredicted RBP9.38□□□□□ -0.91
TREM1-202ENST00000334475 CCDC134Q9H6E4 229 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 PRDM16Q9HAZ2 1276 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 MTMR10Q9NXD2 777 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 GDAP2Q9NXN4 497 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms