RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 NCAPGQ9BPX3 1015 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 SELENOOQ9BVL4 669 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 VN1R3Q9BXE9 311 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 SALL4Q9UJQ4 1053 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 NME7Q9Y5B8 376 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 A0A087X0T9 212 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 RNF40O75150 1001 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 MTA2O94776 668 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 MICAL2O94851 1124 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 GLI1P08151 1106 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 MMEP08473 750 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 PDGFRBP09619 1106 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 FAM228BP0C875 321 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 NPR3P17342 541 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 MMP8P22894 467 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 SPATA2LQ8IUW3 424 aaPredicted RBP10□□□□□ -0.81
C11orf54-201ENST00000331239 GLYCTKQ8IVS8 523 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 RHOT2Q8IXI1 618 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 FUKQ8N0W3 1084 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 VPS52Q8N1B4 723 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 ZNF461Q8TAF7 563 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 RIN2Q8WYP3 895 aaPredicted RBP10□□□□□ -0.81
C11orf54-201ENST00000331239 IRGQQ8WZA9 623 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 PSMB7Q99436 277 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10□□□□□ -0.81
C11orf54-201ENST00000331239 TLR10Q9BXR5 811 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 B3GNT5Q9BYG0 378 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 MRPL47Q9HD33 250 aaKnown RBP10□□□□□ -0.81
C11orf54-201ENST00000331239 UVRAGQ9P2Y5 699 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 HMGXB4Q9UGU5 601 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 GTF3C4Q9UKN8 822 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 TSPAN16Q9UKR8 245 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 SCINQ9Y6U3 715 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 NCK2O43639 380 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 ADH1AP07327 375 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 ACTN2P35609 894 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 PAFAH1B1P43034 410 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 GPC5P78333 572 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 RTP2Q5QGT7 225 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 PPP1R26Q5T8A7 1209 aaPredicted RBP10□□□□□ -0.81
C11orf54-201ENST00000331239 LEKR1Q6ZMV7 388 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 OR10T2Q8NGX3 314 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 AENQ8WTP8 325 aaKnown RBP10□□□□□ -0.81
C11orf54-201ENST00000331239 SLC20A1Q8WUM9 679 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 ZSWIM1Q9BR11 485 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 FAM204AQ9H8W3 233 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 DMAP1Q9NPF5 467 aaPredicted RBP10□□□□□ -0.81
C11orf54-201ENST00000331239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10□□□□□ -0.81
C11orf54-201ENST00000331239 TLR9Q9NR96 1032 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 ASB3Q9Y575 518 aa10□□□□□ -0.81
C11orf54-201ENST00000331239 NCANO14594 1321 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 MTCL1Q9Y4B5 1905 aaKnown RBP9.99□□□□□ -0.81
C11orf54-201ENST00000331239 SOBPA7XYQ1 873 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 BUB1O43683 1085 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 ERBB2P04626 1255 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 CYP1A2P05177 515 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 CXCR5P32302 372 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 NAP1L1P55209 391 aaKnown RBP9.99□□□□□ -0.81
C11orf54-201ENST00000331239 PTPROQ16827 1216 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 GOLGA7BQ2TAP0 167 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 MDH1BQ5I0G3 518 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 RAB41Q5JT25 222 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 MON1BQ7L1V2 547 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 FAM35AQ86V20 835 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 TMEM173Q86WV6 379 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-201ENST00000331239 ERICH1Q86X53 443 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 TCEAL8Q8IYN2 117 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 MCOLN2Q8IZK6 566 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 ZNF276Q8N554 614 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 GOLGA6L1Q8N7Z2 621 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 MRPL43Q8N983 215 aaKnown RBP9.99□□□□□ -0.81
C11orf54-201ENST00000331239 SLC2A14Q8TDB8 520 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 PCED1BQ96HM7 432 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 GDAP1L1Q96MZ0 367 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 PCDHB18PQ96TA0 734 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 RHOBTB2Q9BYZ6 727 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 IL37Q9NZH6 218 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 PLXNA4Q9HCM2 1894 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 MYBPHLA2RUH7 354 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 NT5C1B-RDH14C9J2C7 533 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 I3L4J1 428 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 M0QYV0 167 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 RTN3O95197 1032 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-201ENST00000331239 SYF2O95926 243 aaKnown RBP9.99□□□□□ -0.81
C11orf54-201ENST00000331239 FTLP02792 175 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-201ENST00000331239 HAPLN1P10915 354 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-201ENST00000331239 ATF2P15336 505 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 PPP3CCP48454 512 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 ZNF394Q53GI3 561 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 CCDC149Q6ZUS6 474 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 PAQR9Q6ZVX9 377 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 CEP57Q86XR8 500 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 HASPINQ8TF76 798 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 CTNNBL1Q8WYA6 563 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-201ENST00000331239 OVCA2Q8WZ82 227 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 PPP2R3CQ969Q6 453 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 MYLPFQ96A32 169 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 C18orf8Q96DM3 657 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 CLSTN3Q9BQT9 956 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 LRRC1Q9BTT6 524 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms