RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 SQORQ9Y6N5 450 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 CASTOR2A6NHX0 329 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 KRT14P02533 472 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 MTMR3Q13615 1198 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 CD300LGQ6UXG3 332 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 PRUNE1Q86TP1 453 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 RTN4RL1Q86UN2 441 aaPredicted RBP17.78■□□□□ 0.44
DDX41-201ENST00000330503 UBLCP1Q8WVY7 318 aaPredicted RBP17.78■□□□□ 0.44
DDX41-201ENST00000330503 HSPH1Q92598 858 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 HSFY1Q96LI6 401 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 CCDC114Q96M63 670 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 RUFY1Q96T51 708 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 DUSP16Q9BY84 665 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 DNAI2Q9GZS0 605 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 ASIC3Q9UHC3 531 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 DRG1Q9Y295 367 aaKnown RBP17.78■□□□□ 0.44
DDX41-201ENST00000330503 ATP8A1Q9Y2Q0 1164 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 TIMM13Q9Y5L4 95 aaPredicted RBP17.78■□□□□ 0.44
DDX41-201ENST00000330503 BEST1O76090 585 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 ENDOD1O94919 500 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 GAS8O95995 478 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 POMCP01189 267 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 LCP1P13796 627 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 ITIH2P19823 946 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 IBSPP21815 317 aaPredicted RBP17.77■□□□□ 0.44
DDX41-201ENST00000330503 KLRC2P26717 231 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 ARSEP51690 589 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 ATP11AP98196 1134 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 MBTPS1Q14703 1052 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 RHBDF2Q6PJF5 856 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 ZNF598Q86UK7 904 aaKnown RBP17.77■□□□□ 0.44
DDX41-201ENST00000330503 KCTD6Q8NC69 237 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 OR2W6PQ8NHA6 318 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 FAM204AQ9H8W3 233 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 HMX1Q9NP08 348 aaPredicted RBP17.77■□□□□ 0.44
DDX41-201ENST00000330503 CRTAC1Q9NQ79 661 aa17.77■□□□□ 0.44
DDX41-201ENST00000330503 DDX43Q9NXZ2 648 aaKnown RBP17.77■□□□□ 0.44
DDX41-201ENST00000330503 A0A1W2PQ45 241 aaPredicted RBP17.77■□□□□ 0.43
DDX41-201ENST00000330503 A0A1W2PQY0 241 aa17.77■□□□□ 0.43
DDX41-201ENST00000330503 GOLGA8KD6RF30 607 aa17.77■□□□□ 0.43
DDX41-201ENST00000330503 XPO1O14980 1071 aaKnown RBP17.77■□□□□ 0.43
DDX41-201ENST00000330503 CDR1P51861 262 aa17.77■□□□□ 0.43
DDX41-201ENST00000330503 BYSLQ13895 437 aaKnown RBP17.77■□□□□ 0.43
DDX41-201ENST00000330503 CDO1Q16878 200 aa17.77■□□□□ 0.43
DDX41-201ENST00000330503 TIGD5Q53EQ6 642 aa17.77■□□□□ 0.43
DDX41-201ENST00000330503 SLC26A9Q7LBE3 791 aa17.77■□□□□ 0.43
DDX41-201ENST00000330503 ECHDC2Q86YB7 292 aa17.77■□□□□ 0.43
DDX41-201ENST00000330503 TMEM86AQ8N2M4 240 aa17.77■□□□□ 0.43
DDX41-201ENST00000330503 HAUS1Q96CS2 278 aa17.77■□□□□ 0.43
DDX41-201ENST00000330503 FKTNO75072 461 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 CAND2O75155 1236 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 TFE3P19532 575 aaPredicted RBP17.76■□□□□ 0.43
DDX41-201ENST00000330503 ACADSBP45954 432 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 OASLQ15646 514 aaKnown RBP17.76■□□□□ 0.43
DDX41-201ENST00000330503 MDH1BQ5I0G3 518 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 SPDYCQ5MJ68 293 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 DSTYKQ6XUX3 929 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 BBS12Q6ZW61 710 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 PIGZQ86VD9 579 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 GLIS1Q8NBF1 620 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 SLAIN1Q8ND83 568 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 SLC35B2Q8TB61 432 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 FAM172AQ8WUF8 416 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 ZNF296Q8WUU4 475 aaPredicted RBP17.76■□□□□ 0.43
DDX41-201ENST00000330503 PGBD4Q96DM1 585 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 SNF8Q96H20 258 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 C11orf84Q9BUA3 381 aaPredicted RBP17.76■□□□□ 0.43
DDX41-201ENST00000330503 ADAM33Q9BZ11 813 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 FAM129AQ9BZQ8 928 aa17.76■□□□□ 0.43
DDX41-201ENST00000330503 SAE1Q9UBE0 346 aaPredicted RBP17.76■□□□□ 0.43
DDX41-201ENST00000330503 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.76■□□□□ 0.43
DDX41-201ENST00000330503 CST8O60676 142 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 SCNN1AP37088 669 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 ADCY8P40145 1251 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 LHX1P48742 406 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 PMS2P54278 862 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 VCPP55072 806 aaKnown RBP17.75■□□□□ 0.43
DDX41-201ENST00000330503 CENPIQ92674 756 aaPredicted RBP17.75■□□□□ 0.43
DDX41-201ENST00000330503 NKD2Q969F2 451 aaPredicted RBP17.75■□□□□ 0.43
DDX41-201ENST00000330503 AAASQ9NRG9 546 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 MTRF1LQ9UGC7 380 aaKnown RBP17.75■□□□□ 0.43
DDX41-201ENST00000330503 MYBPHLA2RUH7 354 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 I3L4J1 428 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 SDC4P31431 198 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 GRK4P32298 578 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 VPS41P49754 854 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 DYNLT1P63172 113 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 HTRA3P83110 453 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 ZNF844Q08AG5 666 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 CALCOCO2Q13137 446 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 CEP85LQ5SZL2 805 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 UBAP2Q5T6F2 1119 aaKnown RBP17.75■□□□□ 0.43
DDX41-201ENST00000330503 ARCQ7LC44 396 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 ALLCQ8N6M5 410 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 GOLGA6L1Q8N7Z2 621 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 NDRG1Q92597 394 aaKnown RBP17.75■□□□□ 0.43
DDX41-201ENST00000330503 EXOC4Q96A65 974 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 RTP3Q9BQQ7 232 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 LRRC4CQ9HCJ2 640 aa17.75■□□□□ 0.43
DDX41-201ENST00000330503 UBN1Q9NPG3 1134 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms