RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ISCUQ9H1K1 167 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 HAUS4Q9H6D7 363 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 TASP1Q9H6P5 420 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 SEPT11Q9NVA2 429 aaKnown RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 ADAM22Q9P0K1 906 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 NOCTQ9UK39 431 aaKnown RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 ZNF487B1APH4 448 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 NDC80O14777 642 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 ZBED1O96006 694 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 APOEP02649 317 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PTPN9P43378 593 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 NOMO3P69849 1222 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 RING1Q06587 406 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 KIF5AQ12840 1032 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 HECTD3Q5T447 861 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PM20D1Q6GTS8 502 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 ZDHHC14Q8IZN3 488 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 SLC2A14Q8TDB8 520 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 WHAMMQ8TF30 809 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PCED1BQ96HM7 432 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 SEPT5Q99719 369 aaPredicted RBP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 IER2Q9BTL4 223 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 SDCBP2Q9H190 292 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 IKZF4Q9H2S9 585 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 CRTAC1Q9NQ79 661 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 MTCH2Q9Y6C9 303 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 LCHNA4D1U4 455 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PPEF2O14830 753 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 LRRN2O75325 713 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 RNF8O76064 485 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PDGFRBP09619 1106 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 KCNA4P22459 653 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 NOS2P35228 1153 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 ETFBP38117 255 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 KIF11P52732 1056 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 WNT7BP56706 349 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 SLC6A3Q01959 620 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PDE4CQ08493 712 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 ADCY1Q08828 1119 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PDCLQ13371 301 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PDGFRLQ15198 375 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PKDCCQ504Y2 493 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 SPOPLQ6IQ16 392 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 ALKBH5Q6P6C2 394 aaKnown RBP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 RSPO2Q6UXX9 243 aaPredicted RBP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 STRADAQ7RTN6 431 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 FUKQ8N0W3 1084 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 ATP6V0D2Q8N8Y2 350 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 SLC35F5Q8WV83 523 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 RFFLQ8WZ73 363 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 FERMT1Q9BQL6 677 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 TRPV4Q9HBA0 871 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 DDX56Q9NY93 547 aaKnown RBP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 IGSF9Q9P2J2 1179 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 DNMT3LQ9UJW3 386 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 USP3Q9Y6I4 520 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 WDR27A2RRH5 827 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 MIF4GDA9UHW6 222 aaKnown RBP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 CAPN9O14815 690 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 IRAK2O43187 625 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 TGM5O43548 720 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 GLULP15104 373 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 MMP8P22894 467 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 FSHRP23945 695 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 ADORA2BP29275 332 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 CLCN1P35523 988 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 MAGEA1P43355 309 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 MAGEA9P43362 315 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 VAV2P52735 878 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 ARPP19P56211 112 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PFKPQ01813 784 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 TCEAL5Q5H9L2 206 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 CCDC122Q5T0U0 273 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 DPY19L2P1Q6NXN4 242 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PRSS55Q6UWB4 352 aaPredicted RBP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 IRF2BP2Q7Z5L9 587 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 METTL3Q86U44 580 aaKnown RBP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 OR10T2Q8NGX3 314 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 HASPINQ8TF76 798 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 GDPD5Q8WTR4 605 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 HLA-CQ95604 372 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PGAP3Q96FM1 320 aaPredicted RBP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 RTP3Q9BQQ7 232 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 POPDC2Q9HBU9 364 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 KCND1Q9NSA2 647 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 EPN1Q9Y6I3 576 aaPredicted RBP5.43□□□□□ -1.54
LRIT3-201ENST00000327908 TET1Q8NFU7 2136 aa5.43□□□□□ -1.54
LRIT3-201ENST00000327908 PATJQ8NI35 1801 aa5.42□□□□□ -1.54
LRIT3-201ENST00000327908 SIGLEC16A6NMB1 481 aa5.42□□□□□ -1.54
LRIT3-201ENST00000327908 NT5C1B-RDH14C9J2C7 533 aa5.42□□□□□ -1.54
LRIT3-201ENST00000327908 PJA2O43164 708 aa5.42□□□□□ -1.54
LRIT3-201ENST00000327908 LUC7L3O95232 432 aaKnown RBP5.42□□□□□ -1.54
LRIT3-201ENST00000327908 LTFP02788 710 aa5.42□□□□□ -1.54
LRIT3-201ENST00000327908 CYP1A2P05177 515 aa5.42□□□□□ -1.54
LRIT3-201ENST00000327908 BRD2P25440 801 aaKnown RBP5.42□□□□□ -1.54
LRIT3-201ENST00000327908 SDC4P31431 198 aa5.42□□□□□ -1.54
LRIT3-201ENST00000327908 NRIP1P48552 1158 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms