RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 DMTF1Q9Y222 760 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 PLLPQ9Y342 182 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 SPDYE16A6NNV3 312 aaPredicted RBP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 MAGEB3O15480 346 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 SNNO75324 88 aaPredicted RBP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 UFL1O94874 794 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 HNRNPCP07910 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 INHBAP08476 426 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 CD48P09326 243 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 PMLP29590 882 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 RPL22P35268 128 aaKnown RBP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 CDKN2BP42772 138 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 NCKAP1LP55160 1127 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 MRPS5P82675 430 aaKnown RBP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 ISLR2Q6UXK2 745 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 MAP7D3Q8IWC1 876 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 TAB3Q8N5C8 712 aaPredicted RBP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 RILPQ96NA2 401 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 SENP7Q9BQF6 1050 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 GRIP2Q9C0E4 1043 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 ST6GALNAC4Q9H4F1 302 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 PICK1Q9NRD5 415 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 PLK2Q9NYY3 685 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 MAD1L1Q9Y6D9 718 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 SCINQ9Y6U3 715 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 ZNF831Q5JPB2 1677 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 TMEM221A6NGB7 291 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 CCDC160A6NGH7 325 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 CYB561D2O14569 222 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 DNAJA2O60884 412 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 FAM155BO75949 473 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 ARP10275 920 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 SLC5A2P31639 672 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 SSTR3P32745 418 aaPredicted RBP13.31□□□□□ -0.28
CCDC60-201ENST00000327554 ECE1P42892 770 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 KCNQ4P56696 695 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 PSMC5P62195 406 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 UBXN2AP68543 259 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 CBX3Q13185 183 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 MTA1Q13330 715 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 TMED1Q13445 227 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 GRAMD1BQ3KR37 738 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 TFDP3Q5H9I0 405 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 SH3D19Q5HYK7 790 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 PHF13Q86YI8 300 aaPredicted RBP13.31□□□□□ -0.28
CCDC60-201ENST00000327554 CRLF3Q8IUI8 442 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 POU5F2Q8N7G0 328 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 ZBTB8BQ8NAP8 495 aaPredicted RBP13.31□□□□□ -0.28
CCDC60-201ENST00000327554 TMC2Q8TDI7 906 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 VCPIP1Q96JH7 1222 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 ZFRQ96KR1 1074 aaKnown RBP13.31□□□□□ -0.28
CCDC60-201ENST00000327554 MRPS26Q9BYN8 205 aaKnown RBP13.31□□□□□ -0.28
CCDC60-201ENST00000327554 WDR11Q9BZH6 1224 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 IQCGQ9H095 443 aaKnown RBP13.31□□□□□ -0.28
CCDC60-201ENST00000327554 NYAP2Q9P242 653 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 SAE1Q9UBE0 346 aaPredicted RBP13.31□□□□□ -0.28
CCDC60-201ENST00000327554 IP6K2Q9UHH9 426 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 NARFQ9UHQ1 456 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 CDH22Q9UJ99 828 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 SORCS3Q9UPU3 1222 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 INPP5FQ9Y2H2 1132 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 DTNAQ9Y4J8 743 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 IKBKGQ9Y6K9 419 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 ZHX2Q9Y6X8 837 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 SLX4Q8IY92 1834 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 TRIM49D1C9J1S8 452 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 SLC16A4O15374 487 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 C1QAP02745 245 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 ELK3P41970 407 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 WASHC5Q12768 1159 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 RABGAP1LQ5R372 815 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 PDIK1LQ8N165 341 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 ACTRT2Q8TDY3 377 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 SNRNP27Q8WVK2 155 aaKnown RBP13.31□□□□□ -0.28
CCDC60-201ENST00000327554 CCDC124Q96CT7 223 aaKnown RBP13.31□□□□□ -0.28
CCDC60-201ENST00000327554 MAML3Q96JK9 1138 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 CCDC17Q96LX7 622 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 MFSD14AQ96MC6 490 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 XPO7Q9UIA9 1087 aaKnown RBP13.31□□□□□ -0.28
CCDC60-201ENST00000327554 POMPQ9Y244 141 aa13.31□□□□□ -0.28
CCDC60-201ENST00000327554 KBTBD13C9JR72 458 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 SERPINB8P50452 374 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 MYBPC1Q00872 1141 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 LRRC38Q5VT99 294 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 KBTBD6Q86V97 674 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 NUP93Q8N1F7 819 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 HIPK4Q8NE63 616 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 DCUN1D1Q96GG9 259 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 ZNF577Q9BSK1 485 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 BTBD7Q9P203 1132 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 QSER1Q2KHR3 1735 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 ASTN2O75129 1339 aaPredicted RBP13.3□□□□□ -0.28
CCDC60-201ENST00000327554 STRCQ7RTU9 1775 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 TMEM191CA6NGB0 347 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 TMEM191BP0C7N4 346 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 ABCD1P33897 745 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 SERPINB6P35237 376 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 ALDH1A3P47895 512 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 IRX4P78413 519 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms