RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 RUBCNQ92622 972 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 TTC17Q96AE7 1141 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 SNX25Q9H3E2 840 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 UBP1Q9NZI7 540 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 MARCOQ9UEW3 520 aaPredicted RBP11.14□□□□□ -0.63
CUL4A-201ENST00000326335 TPX2Q9ULW0 747 aaKnown RBP11.14□□□□□ -0.63
CUL4A-201ENST00000326335 SNX10Q9Y5X0 201 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 TTC3P53804 2025 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 DNM1LO00429 736 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 TOP3BO95985 862 aaKnown RBP11.14□□□□□ -0.63
CUL4A-201ENST00000326335 P4HA1P13674 534 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 KRT4P19013 534 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 SESN2P58004 480 aaPredicted RBP11.14□□□□□ -0.63
CUL4A-201ENST00000326335 PIGHQ14442 188 aaPredicted RBP11.14□□□□□ -0.63
CUL4A-201ENST00000326335 CD302Q8IX05 232 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 UNC5BQ8IZJ1 945 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 MSL3Q8N5Y2 521 aaKnown RBP11.14□□□□□ -0.63
CUL4A-201ENST00000326335 FBF1Q8TES7 1133 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 TACO1Q9BSH4 297 aaKnown RBP11.14□□□□□ -0.63
CUL4A-201ENST00000326335 OSBPL7Q9BZF2 842 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 ADAM7Q9H2U9 754 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 DNAJC25-GNG10A0A024R161 153 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 MTA2O94776 668 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 TMEM63AO94886 807 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 ZBED1O96006 694 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 VCPP55072 806 aaKnown RBP11.14□□□□□ -0.63
CUL4A-201ENST00000326335 HADHBP55084 474 aaKnown RBP11.14□□□□□ -0.63
CUL4A-201ENST00000326335 GBE1Q04446 702 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 KLF1Q13351 362 aaPredicted RBP11.14□□□□□ -0.63
CUL4A-201ENST00000326335 PTK6Q13882 451 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 PLEKHH3Q7Z736 793 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 CCDC63Q8NA47 563 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 CCDC197Q8NCU1 140 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 RUNDC3BQ96NL0 473 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 GCOM2Q9BZD3 368 aaPredicted RBP11.14□□□□□ -0.63
CUL4A-201ENST00000326335 HOMER3Q9NSC5 361 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 DOCK1Q14185 1865 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 MYO9BQ13459 2157 aa11.14□□□□□ -0.63
CUL4A-201ENST00000326335 GLTPD2A6NH11 291 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 CAPN9O14815 690 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 SPTLC1O15269 473 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 CILPO75339 1184 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 AMPD1P23109 780 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 RPA3P35244 121 aaPredicted RBP11.13□□□□□ -0.63
CUL4A-201ENST00000326335 PGGT1BP53609 377 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 MDH1BQ5I0G3 518 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 HHATQ5VTY9 493 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 MICALCLQ6ZW33 695 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 MORC4Q8TE76 937 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 ZIC5Q96T25 663 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 PAAF1Q9BRP4 392 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 SIK2Q9H0K1 926 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 TRABDQ9H4I3 376 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 CD248Q9HCU0 757 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 PAPPA2Q9BXP8 1791 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 MYADML2A6NDP7 307 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 KCNK1O00180 336 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 TNPO2O14787 897 aaKnown RBP11.13□□□□□ -0.63
CUL4A-201ENST00000326335 PIGRP01833 764 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 GPD1P21695 349 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 GPD2P43304 727 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 MAGEA9P43362 315 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 MAP3K7CLP57077 242 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 CLDN10P78369 228 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 SOX4Q06945 474 aaPredicted RBP11.13□□□□□ -0.63
CUL4A-201ENST00000326335 CNGA2Q16280 664 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 MARCH8Q5T0T0 291 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 AGBL2Q5U5Z8 902 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 CDCA2Q69YH5 1023 aaPredicted RBP11.13□□□□□ -0.63
CUL4A-201ENST00000326335 RFX8Q6ZV50 586 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 MAIP1Q8WWC4 291 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 PPM1EQ8WY54 764 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 RNF34Q969K3 372 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 GAD1Q99259 594 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 UNKQ9C0B0 810 aaKnown RBP11.13□□□□□ -0.63
CUL4A-201ENST00000326335 PTPRHQ9HD43 1115 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 B4GALT4O60513 344 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 GBP2P32456 591 aaPredicted RBP11.13□□□□□ -0.63
CUL4A-201ENST00000326335 GNL1P36915 607 aaPredicted RBP11.13□□□□□ -0.63
CUL4A-201ENST00000326335 ELK3P41970 407 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 ADIGQ0VDE8 80 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 IGDCC3Q8IVU1 814 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 SEC14L1Q92503 715 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 LGMNQ99538 433 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 FAM129AQ9BZQ8 928 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 ARHGAP39Q9C0H5 1083 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 WHRNQ9P202 907 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 BARX2Q9UMQ3 279 aaPredicted RBP11.13□□□□□ -0.63
CUL4A-201ENST00000326335 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.13□□□□□ -0.63
CUL4A-201ENST00000326335 WDR81Q562E7 1941 aa11.13□□□□□ -0.63
CUL4A-201ENST00000326335 NUP205Q92621 2012 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 F8W810 466 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 GOLGA8TH3BQL2 631 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 UGT1A9O60656 530 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 EIF4BP23588 611 aaKnown RBP11.12□□□□□ -0.63
CUL4A-201ENST00000326335 MLH1P40692 756 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 ARPP19P56211 112 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 AP1B1Q10567 949 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 IL31Q6EBC2 164 aa11.12□□□□□ -0.63
CUL4A-201ENST00000326335 KCNV1Q6PIU1 500 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms