RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 FAM171A1Q5VUB5 890 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 LLGL2Q6P1M3 1020 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 KCNT2Q6UVM3 1135 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 CLEC20AQ6ZU45 233 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 FAM35AQ86V20 835 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 LRRTM3Q86VH5 581 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 XYLT1Q86Y38 959 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 SLC39A11Q8N1S5 342 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 FEZF2Q8TBJ5 459 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 PHOSPHO2Q8TCD6 241 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 COG1Q8WTW3 980 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 KCTD13Q8WZ19 329 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 MCRS1Q96EZ8 462 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 IGSF21Q96ID5 467 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 HSFY1Q96LI6 401 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 OXCT2Q9BYC2 517 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-202ENST00000324340 ZCWPW1Q9H0M4 648 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 CSNK1G1Q9HCP0 422 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 TJP2Q9UDY2 1190 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 CHORDC1Q9UHD1 332 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-202ENST00000324340 KIAA1671Q9BY89 1806 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 TMEM191CA6NGB0 347 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 OR6C75A6NL08 312 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 SIGLEC16A6NMB1 481 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 NT5C1B-RDH14C9J2C7 533 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 SCNN1AP37088 669 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 PBX3P40426 434 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 TSPY1Q01534 308 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 CYP4A22Q5TCH4 519 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 EMC10Q5UCC4 262 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 DNAJC24Q6P3W2 148 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 DAAM2Q86T65 1068 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 NT5DC3Q86UY8 548 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 ZDHHC17Q8IUH5 632 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 MYLPFQ96A32 169 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 ZBTB9Q96C00 473 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 SMARCD1Q96GM5 515 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 ZNF558Q96NG5 402 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 TMEM209Q96SK2 561 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 SLC9A7Q96T83 725 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 TLR10Q9BXR5 811 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 TMLHEQ9NVH6 421 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 CXXC1Q9P0U4 656 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-202ENST00000324340 HPCAL4Q9UM19 191 aa13.41□□□□□ -0.26
DDX39A-202ENST00000324340 MRPL42Q9Y6G3 142 aaKnown RBP13.41□□□□□ -0.26
DDX39A-202ENST00000324340 ZBBXA8MT70 800 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 E5RJQ4 531 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 CLDN5O00501 218 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 ENC1O14682 589 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 OPA1O60313 960 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 BEST1O76090 585 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 FTCDO95954 541 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 LINC00271P0C7V0 271 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 FAM200BP0CF97 657 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 SYN1P17600 705 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 ACADSBP45954 432 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 IRAK1P51617 712 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 SLC8A3P57103 927 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 MLLT1Q03111 559 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-202ENST00000324340 RTP2Q5QGT7 225 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 RASIP1Q5U651 963 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 ZNF280DQ6N043 979 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 FAM117BQ6P1L5 589 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 PIGZQ86VD9 579 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 DCP1BQ8IZD4 617 aaKnown RBP13.4□□□□□ -0.26
DDX39A-202ENST00000324340 COLGALT1Q8NBJ5 622 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 GIMAP7Q8NHV1 300 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 FNIP1Q8TF40 1166 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 HES6Q96HZ4 224 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 YME1L1Q96TA2 773 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 MED10Q9BTT4 135 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 TTPALQ9BTX7 342 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 GOLPH3Q9H4A6 298 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 SYNCQ9H7C4 482 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 CHST7Q9NS84 486 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 KRT82Q9NSB4 513 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 ANAPC7Q9UJX3 599 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 SNX12Q9UMY4 172 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 ALG6Q9Y672 507 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 PATJQ8NI35 1801 aa13.4□□□□□ -0.26
DDX39A-202ENST00000324340 H7C4K7 107 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 MYO1FO00160 1098 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 EIF3HO15372 352 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDX39A-202ENST00000324340 MAN1A1P33908 653 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 RDXP35241 583 aaKnown RBP13.39□□□□□ -0.27
DDX39A-202ENST00000324340 SLC1A1P43005 524 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 RPL7AP62424 266 aaKnown RBP13.39□□□□□ -0.27
DDX39A-202ENST00000324340 ITIH3Q06033 890 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 NFE2Q16621 373 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-202ENST00000324340 CFAP221Q4G0U5 840 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 PREPLQ4J6C6 727 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-202ENST00000324340 CTXN3Q4LDR2 81 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 RAB41Q5JT25 222 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 OLFML1Q6UWY5 402 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 C4orf50Q6ZRC1 276 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 FAM183BPQ6ZVS7 135 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 ANKS3Q6ZW76 656 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 TAS1R1Q7RTX1 841 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 PEX26Q7Z412 305 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms