RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 SLC26A4O43511 780 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 ATP5HO75947 161 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 OR6B1O95007 311 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 ALDH18A1P54886 795 aaKnown RBP12.72□□□□□ -0.37
SEC24A-201ENST00000322887 GEMIN4P57678 1058 aaKnown RBP12.72□□□□□ -0.37
SEC24A-201ENST00000322887 ROR2Q01974 943 aaKnown RBP12.72□□□□□ -0.37
SEC24A-201ENST00000322887 CAV1Q03135 178 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 HIF1AQ16665 826 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 UNC45BQ8IWX7 931 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 POU5F2Q8N7G0 328 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 RBM15BQ8NDT2 890 aaKnown RBP12.72□□□□□ -0.37
SEC24A-201ENST00000322887 MZB1Q8WU39 189 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 CPT1BQ92523 772 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 PANX3Q96QZ0 392 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 MXRA8Q9BRK3 442 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 SLC13A1Q9BZW2 595 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 RIPK3Q9Y572 518 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 hCG_2014768A0A024R1R8 64 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 E2F8A0AVK6 867 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 STRNO43815 780 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 CCDC22O60826 627 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 RNASEH1O60930 286 aaKnown RBP12.72□□□□□ -0.37
SEC24A-201ENST00000322887 HLA-DRAP01903 254 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 DLDP09622 509 aaKnown RBP12.72□□□□□ -0.37
SEC24A-201ENST00000322887 CD1EP15812 388 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 GNA15P30679 374 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 RTP1P59025 263 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 NOMO3P69849 1222 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 GRM1Q13255 1194 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 Q3C1V9 767 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 NPNTQ6UXI9 565 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 EMC1Q8N766 993 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 DCAKDQ8WVC6 231 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 PYDC1Q8WXC3 89 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 STMN2Q93045 179 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 SKA1Q96BD8 255 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 EBF4Q9BQW3 602 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 HAPLN2Q9GZV7 340 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 SMYD3Q9H7B4 428 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 TLE6Q9H808 572 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 C1orf112Q9NSG2 853 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 PCSK1NQ9UHG2 260 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 LRCH1Q9Y2L9 728 aa12.72□□□□□ -0.37
SEC24A-201ENST00000322887 TRAFD1O14545 582 aaPredicted RBP12.71□□□□□ -0.37
SEC24A-201ENST00000322887 LPXNO60711 386 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 VNN1O95497 513 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 P4HBP07237 508 aaKnown RBP12.71□□□□□ -0.37
SEC24A-201ENST00000322887 TROVE2P10155 538 aaKnown RBP eCLIP12.71□□□□□ -0.378e-11■■□□□ 14.5
SEC24A-201ENST00000322887 BRD2P25440 801 aaKnown RBP12.71□□□□□ -0.37
SEC24A-201ENST00000322887 CCNFP41002 786 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 RANBP1P43487 201 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 BASP1P80723 227 aaKnown RBP12.71□□□□□ -0.37
SEC24A-201ENST00000322887 HTRA3P83110 453 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 LAMB3Q13751 1172 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 RASA2Q15283 850 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 LPCAT4Q643R3 524 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 SPOCD1Q6ZMY3 1216 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 RIPOR1Q6ZS17 1223 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 ANO5Q75V66 913 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 BANPQ8N9N5 519 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 FAM71DQ8N9W8 422 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 EBF3Q9H4W6 596 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 KMT5AQ9NQR1 393 aa12.71□□□□□ -0.37
SEC24A-201ENST00000322887 PPARGC1AQ9UBK2 798 aaKnown RBP12.71□□□□□ -0.37
SEC24A-201ENST00000322887 SMG5Q9UPR3 1016 aaKnown RBP12.71□□□□□ -0.37
SEC24A-201ENST00000322887 A6NJR5 290 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 ALOX15BO15296 676 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 RTN3O95197 1032 aaPredicted RBP12.71□□□□□ -0.38
SEC24A-201ENST00000322887 GSTT1P30711 240 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 QARSP47897 775 aaKnown RBP12.71□□□□□ -0.38
SEC24A-201ENST00000322887 OTUD4Q01804 1114 aaKnown RBP12.71□□□□□ -0.38
SEC24A-201ENST00000322887 LBRQ14739 615 aaKnown RBP12.71□□□□□ -0.38
SEC24A-201ENST00000322887 KBTBD12Q3ZCT8 623 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 IRGCQ6NXR0 463 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 SCARA5Q6ZMJ2 495 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 SYDE1Q6ZW31 735 aaPredicted RBP12.71□□□□□ -0.38
SEC24A-201ENST00000322887 CENPUQ71F23 418 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 TAS1R3Q7RTX0 852 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 KATNAL2Q8IYT4 538 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 GSTCDQ8NEC7 633 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 OR5B17Q8NGF7 314 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 ACTL9Q8TC94 416 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 GATA6Q92908 595 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 CCDC124Q96CT7 223 aaKnown RBP12.71□□□□□ -0.38
SEC24A-201ENST00000322887 FNBP1Q96RU3 617 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 TRIM55Q9BYV6 548 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 RNF186Q9NXI6 227 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 SLC17A6Q9P2U8 582 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 LNPEPQ9UIQ6 1025 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 NUB1Q9Y5A7 615 aa12.71□□□□□ -0.38
SEC24A-201ENST00000322887 MYOCOSA0A1B0GUC4 107 aa12.7□□□□□ -0.38
SEC24A-201ENST00000322887 ANKRD33BA6NCL7 494 aa12.7□□□□□ -0.38
SEC24A-201ENST00000322887 CXorf49A8MYA2 514 aaPredicted RBP12.7□□□□□ -0.38
SEC24A-201ENST00000322887 P4HA2O15460 535 aa12.7□□□□□ -0.38
SEC24A-201ENST00000322887 ABHD2P08910 425 aa12.7□□□□□ -0.38
SEC24A-201ENST00000322887 IL1R2P27930 398 aa12.7□□□□□ -0.38
SEC24A-201ENST00000322887 SLC1A1P43005 524 aa12.7□□□□□ -0.38
SEC24A-201ENST00000322887 PTP4A2Q12974 167 aa12.7□□□□□ -0.38
SEC24A-201ENST00000322887 RNF111Q6ZNA4 994 aa12.7□□□□□ -0.38
SEC24A-201ENST00000322887 ARID3BQ8IVW6 561 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms