RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 NUP93Q8N1F7 819 aa16.55■□□□□ 0.24
FOXR1-201ENST00000317011 TAF4BQ92750 862 aa16.55■□□□□ 0.24
FOXR1-201ENST00000317011 SECISBP2LQ93073 1101 aaKnown RBP16.55■□□□□ 0.24
FOXR1-201ENST00000317011 ATP2A3Q93084 1043 aa16.55■□□□□ 0.24
FOXR1-201ENST00000317011 P2RY13Q9BPV8 354 aa16.55■□□□□ 0.24
FOXR1-201ENST00000317011 SCAND2PQ9GZW5 306 aaPredicted RBP16.55■□□□□ 0.24
FOXR1-201ENST00000317011 SMYD3Q9H7B4 428 aa16.55■□□□□ 0.24
FOXR1-201ENST00000317011 NCDNQ9UBB6 729 aa16.55■□□□□ 0.24
FOXR1-201ENST00000317011 LEFTY2O00292 366 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 ASS1P00966 412 aaKnown RBP16.54■□□□□ 0.24
FOXR1-201ENST00000317011 RETP07949 1114 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 ZDHHC11BP0C7U3 371 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 KCNB1Q14721 858 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 GAB4Q2WGN9 574 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 ZNF699Q32M78 642 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 KRBA2Q6ZNG9 492 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 CPA6Q8N4T0 437 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 OVCA2Q8WZ82 227 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 KCNK16Q96T55 309 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 HINFPQ9BQA5 517 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 PARD6AQ9NPB6 346 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 COMMD8Q9NX08 183 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 WNT6Q9Y6F9 365 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 ANAPC1Q9H1A4 1944 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 OBSL1O75147 1896 aa16.54■□□□□ 0.24
FOXR1-201ENST00000317011 A0A0A0MRY4 1105 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 LRP3O75074 770 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 YWHAQP27348 245 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 NR1H3Q13133 447 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 BIRC3Q13489 604 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 SIM2Q14190 667 aaPredicted RBP16.53■□□□□ 0.24
FOXR1-201ENST00000317011 UNC93AQ86WB7 457 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 FUKQ8N0W3 1084 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 GUF1Q8N442 669 aaKnown RBP16.53■□□□□ 0.24
FOXR1-201ENST00000317011 CAMKK1Q8N5S9 505 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 CD101Q93033 1021 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 EXOC4Q96A65 974 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 ELMO3Q96BJ8 720 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 TNIP3Q96KP6 325 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 DUSP9Q99956 384 aaKnown RBP16.53■□□□□ 0.24
FOXR1-201ENST00000317011 GOLPH3LQ9H4A5 285 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 CSNK1G1Q9HCP0 422 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 PTPRDP23468 1912 aa16.53■□□□□ 0.24
FOXR1-201ENST00000317011 PRR5-ARHGAP8B1AHC4 643 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 CALUO43852 315 aaPredicted RBP16.52■□□□□ 0.24
FOXR1-201ENST00000317011 AKAP3O75969 853 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 ZNF202O95125 648 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 RTN3O95197 1032 aaPredicted RBP16.52■□□□□ 0.24
FOXR1-201ENST00000317011 KIF20AO95235 890 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 OPRD1P41143 372 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 IFNAR2P48551 515 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 ARHGAP8P85298 464 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 SRSF5Q13243 272 aaKnown RBP16.52■□□□□ 0.24
FOXR1-201ENST00000317011 RSPO4Q2I0M5 234 aaPredicted RBP16.52■□□□□ 0.24
FOXR1-201ENST00000317011 ZCWPW2Q504Y3 356 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 ZMIZ2Q8NF64 920 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 SLITRK1Q96PX8 696 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 GMEB2Q9UKD1 530 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 FRMD4BQ9Y2L6 1034 aa16.52■□□□□ 0.24
FOXR1-201ENST00000317011 RNF40O75150 1001 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 SDHBP21912 280 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 ASPAP45381 313 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 RAP1GAPP47736 663 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 VAMP7P51809 220 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 SYT13Q7L8C5 426 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 ACOT1Q86TX2 421 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 FAM35AQ86V20 835 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 PDZD8Q8NEN9 1154 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 SCAMP5Q8TAC9 235 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 ZFRQ96KR1 1074 aaKnown RBP16.51■□□□□ 0.23
FOXR1-201ENST00000317011 SMOQ99835 787 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 EBF1Q9UH73 591 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 CHORDC1Q9UHD1 332 aaPredicted RBP16.51■□□□□ 0.23
FOXR1-201ENST00000317011 RAB23Q9ULC3 237 aa16.51■□□□□ 0.23
FOXR1-201ENST00000317011 ZNF638Q14966 1978 aaKnown RBP16.5■□□□□ 0.23
FOXR1-201ENST00000317011 K7EQS6 105 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 BEST1O76090 585 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 NFATC1O95644 943 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 HLA-DRAP01903 254 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 CHRM1P11229 460 aaPredicted RBP16.5■□□□□ 0.23
FOXR1-201ENST00000317011 P4HA1P13674 534 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 TUBP50607 506 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 NDST1P52848 882 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 ATXN1P54253 815 aaKnown RBP16.5■□□□□ 0.23
FOXR1-201ENST00000317011 PPP3CAQ08209 521 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 INCA1Q0VD86 236 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 ADAM9Q13443 819 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 CEP135Q66GS9 1140 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 HEATR6Q6AI08 1181 aaKnown RBP16.5■□□□□ 0.23
FOXR1-201ENST00000317011 RHBDF2Q6PJF5 856 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 INTS8Q75QN2 995 aaKnown RBP16.5■□□□□ 0.23
FOXR1-201ENST00000317011 SMARCD1Q96GM5 515 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 LOXL4Q96JB6 756 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 CYP3A43Q9HB55 503 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 APOBEC3GQ9HC16 384 aaKnown RBP16.5■□□□□ 0.23
FOXR1-201ENST00000317011 POLR3BQ9NW08 1133 aaPredicted RBP16.5■□□□□ 0.23
FOXR1-201ENST00000317011 CPQQ9Y646 472 aa16.5■□□□□ 0.23
FOXR1-201ENST00000317011 E2F8A0AVK6 867 aa16.49■□□□□ 0.23
FOXR1-201ENST00000317011 SLC9A3R1O14745 358 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms