RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 GPBP1L1Q9HC44 474 aaPredicted RBP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 PCSK1NQ9UHG2 260 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ANKRD62A6NC57 917 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 MINDY4BA8MYZ0 360 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 KCNK3O14649 394 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 RGS13O14921 159 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ZNF254O75437 659 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 RSL1D1O76021 490 aaKnown RBP6.92□□□□□ -1.3
ZNF540-201ENST00000316433 RARGP13631 454 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 IL32P24001 234 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 KLK7P49862 253 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 CDK9P50750 372 aaKnown RBP6.92□□□□□ -1.3
ZNF540-201ENST00000316433 SLC5A3P53794 718 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 AQP4P55087 323 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 STRN3Q13033 797 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ERFEQ4G0M1 354 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 SGO2Q562F6 1265 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 SLC45A4Q5BKX6 768 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 OGFOD2Q6N063 350 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 RRAGAQ7L523 313 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 HEATR4Q86WZ0 1026 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 LRRC6Q86X45 466 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-201ENST00000316433 GSDMBQ8TAX9 411 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 LENG9Q96B70 501 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ZBED2Q9BTP6 218 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 TUBB6Q9BUF5 446 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 IMPG2Q9BZV3 1241 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 GPR88Q9GZN0 384 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 WNT8AQ9H1J5 351 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 IGSF5Q9NSI5 407 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ARMC1Q9NVT9 282 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 VAV3Q9UKW4 847 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 COQ4Q9Y3A0 265 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ASTN1O14525 1302 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 RSPH10B2B2RC85 870 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 SULT1C4O75897 302 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 RSPH10BP0C881 870 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 CREB1P16220 341 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 PRKACAP17612 351 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 NR1H2P55055 460 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 PPP2R2BQ00005 443 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 IFITM2Q01629 132 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 GBE1Q04446 702 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 FOLH1Q04609 750 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 STILQ15468 1287 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 NANOGP8Q6NSW7 305 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 FBXL19Q6PCT2 694 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ZDHHC24Q6UX98 284 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 SLC30A10Q6XR72 485 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 CLNKQ7Z7G1 428 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ADGRG6Q86SQ4 1221 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 GALNT6Q8NCL4 622 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ANGPTL6Q8NI99 470 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ANKRD49Q8WVL7 239 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 C10orf82Q8WW14 230 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 SLC35C1Q96A29 364 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 COQ7Q99807 217 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 FRMD8P1Q9BZ68 369 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-201ENST00000316433 TRIM31Q9BZY9 425 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 SEMA4AQ9H3S1 761 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 LIN28AQ9H9Z2 209 aaKnown RBP6.92□□□□□ -1.3
ZNF540-201ENST00000316433 AVENQ9NQS1 362 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-201ENST00000316433 SACM1LQ9NTJ5 587 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 PHTF1Q9UMS5 762 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 COMMD10Q9Y6G5 202 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 SCINQ9Y6U3 715 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 LRRC37A2A6NM11 1700 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 PAPPA2Q9BXP8 1791 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 A0A087X0T9 212 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ARPC4-TTLL3A0A0A6YYG9 625 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 KRBA1A5PL33 1030 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 KRIT1O00522 736 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 GNPATO15228 680 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 CCNT1O60563 726 aaKnown RBP6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ZC3H11AO75152 810 aaKnown RBP eCLIP6.92□□□□□ -1.3
ZNF540-201ENST00000316433 SPAG7O75391 227 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 UFL1O94874 794 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 KLHL2O95198 593 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 H2AFZP0C0S5 128 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 FAM228BP0C875 321 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 M6PRP20645 277 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 FOXN2P32314 431 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 SOX5P35711 763 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 STAT1P42224 750 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 GYG1P46976 350 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 RAP1GDS1P52306 607 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 COX10Q12887 443 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 MAPK7Q13164 816 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 KCTD19Q17RG1 926 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-201ENST00000316433 RGS21Q2M5E4 152 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 CEP78Q5JTW2 689 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 RFX8Q6ZV50 586 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 STXBP4Q6ZWJ1 553 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 H2AFVQ71UI9 128 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ZNF571Q7Z3V5 609 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-201ENST00000316433 GALNT7Q86SF2 657 aa6.92□□□□□ -1.3
ZNF540-201ENST00000316433 ZNF444Q8N0Y2 327 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-201ENST00000316433 MARVELD2Q8N4S9 558 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms