RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CCDC33Q8N5R6 958 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 ATP6V0D2Q8N8Y2 350 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 TFB1MQ8WVM0 346 aaKnown RBP14.25□□□□□ -0.13
DDX54-202ENST00000314045 ELAC2Q9BQ52 826 aaKnown RBP14.25□□□□□ -0.13
DDX54-202ENST00000314045 STK38LQ9Y2H1 464 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 PCDHB5Q9Y5E4 795 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 CCDC78A2IDD5 438 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 S100BP04271 92 aaPredicted RBP14.24□□□□□ -0.13
DDX54-202ENST00000314045 GLI1P08151 1106 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 TYK2P29597 1187 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 SLC6A3Q01959 620 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 EFEMP1Q12805 493 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 BTG3Q14201 252 aaPredicted RBP14.24□□□□□ -0.13
DDX54-202ENST00000314045 SLC29A2Q14542 456 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 LONRF1Q17RB8 773 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 TTC31Q49AM3 519 aaPredicted RBP14.24□□□□□ -0.13
DDX54-202ENST00000314045 KLC3Q6P597 504 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 ZDHHC17Q8IUH5 632 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 PPIL6Q8IXY8 311 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 REM2Q8IYK8 340 aaPredicted RBP14.24□□□□□ -0.13
DDX54-202ENST00000314045 LRRN4CLQ8ND94 238 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 SMARCD1Q96GM5 515 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 ZIM3Q96PE6 472 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 DEFB118Q96PH6 123 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 SLC13A1Q9BZW2 595 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 DMAP1Q9NPF5 467 aaPredicted RBP14.24□□□□□ -0.13
DDX54-202ENST00000314045 ANGPTL3Q9Y5C1 460 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 TOGARAM1Q9Y4F4 1720 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 DNAJB2P25686 324 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 CCL23P55773 120 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 MAP3K10Q02779 954 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 KCNA10Q16322 511 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 BEND6Q5SZJ8 279 aaPredicted RBP14.24□□□□□ -0.13
DDX54-202ENST00000314045 C3orf62Q6ZUJ4 267 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 DEFB106AQ8N104 65 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 LRRC52Q8N7C0 313 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 TMEM121Q9BTD3 319 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 BDNFP23560 247 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 ADSSP30520 456 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 FSTL1Q12841 308 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 TMC7Q7Z402 723 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 TBCBQ99426 244 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 MRPL9Q9BYD2 267 aaKnown RBP14.24□□□□□ -0.13
DDX54-202ENST00000314045 RASSF4Q9H2L5 321 aa14.24□□□□□ -0.13
DDX54-202ENST00000314045 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.24□□□□□ -0.13
DDX54-202ENST00000314045 CHD4Q14839 1912 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 C22orf31O95567 290 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 MIPP30301 263 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 RFC1P35251 1148 aaPredicted RBP14.23□□□□□ -0.13
DDX54-202ENST00000314045 CTCFP49711 727 aaPredicted RBP14.23□□□□□ -0.13
DDX54-202ENST00000314045 PRKCZQ05513 592 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 LRRC14Q15048 493 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 ATG16L1Q676U5 607 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 ZNF467Q7Z7K2 595 aaPredicted RBP14.23□□□□□ -0.13
DDX54-202ENST00000314045 FRMD8P1Q9BZ68 369 aaPredicted RBP14.23□□□□□ -0.13
DDX54-202ENST00000314045 SH3BP1Q9Y3L3 701 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 ZMYM2Q9UBW7 1377 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 LRG1P02750 347 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 C4BPAP04003 597 aaKnown RBP14.23□□□□□ -0.13
DDX54-202ENST00000314045 NOMO3P69849 1222 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 ZNF200P98182 395 aaPredicted RBP14.23□□□□□ -0.13
DDX54-202ENST00000314045 HGSNATQ68CP4 663 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 PPFIBP2Q8ND30 876 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 ZSWIM2Q8NEG5 633 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 SCG3Q8WXD2 468 aaKnown RBP14.23□□□□□ -0.13
DDX54-202ENST00000314045 ASIC4Q96FT7 647 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 ELOVL4Q9GZR5 314 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 TRPM5Q9NZQ8 1165 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 IPPQ9Y573 584 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 CAPN7Q9Y6W3 813 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 COL2A1P02458 1487 aaPredicted RBP14.23□□□□□ -0.13
DDX54-202ENST00000314045 RARAP10276 462 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 H2AFXP16104 143 aaPredicted RBP14.23□□□□□ -0.13
DDX54-202ENST00000314045 MAMLD1Q13495 774 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 LRIG3Q6UXM1 1119 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 C4orf22Q6V702 233 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 GANCQ8TET4 914 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 THOC1Q96FV9 657 aaKnown RBP14.23□□□□□ -0.13
DDX54-202ENST00000314045 PDZD7Q9H5P4 517 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 L1RE1Q9UN81 338 aa14.23□□□□□ -0.13
DDX54-202ENST00000314045 SLC12A8A0AV02 714 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 PSMD3O43242 534 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 SPAG7O75391 227 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 SLC11A2P49281 568 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 LIG3P49916 1009 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 HELQQ8TDG4 1101 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 C18orf25Q96B23 403 aaPredicted RBP14.22□□□□□ -0.13
DDX54-202ENST00000314045 ULBP1Q9BZM6 244 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 MUC3BQ9H195 1237 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 BAIAP2L1Q9UHR4 511 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 FIS1Q9Y3D6 152 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 SMIM28A0A1B0GU29 152 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 AP3B1O00203 1094 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 TSPAN1O60635 241 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 AGTP01019 485 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 MBTD1Q05BQ5 628 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 ZNF662Q6ZS27 426 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 APTXQ7Z2E3 356 aaKnown RBP14.22□□□□□ -0.13
DDX54-202ENST00000314045 IPMKQ8NFU5 416 aa14.22□□□□□ -0.13
DDX54-202ENST00000314045 LRRC15Q8TF66 581 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms