RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TMEM132BQ14DG7 1078 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 USP17L6PQ6QN14 398 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 PGBD3Q8N328 593 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 NLNQ9BYT8 704 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 SDR42E2A6NKP2 422 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 KPNA1P52294 538 aaPredicted RBP16■□□□□ 0.15
HCFC1-201ENST00000310441 EPHA7Q15375 998 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 SLC25A24Q6NUK1 477 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 RNF149Q8NC42 400 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 SMIM22K7EJ46 135 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 EXTL3O43909 919 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 SRGNP10124 158 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 PTPN21Q16825 1174 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 ATP6AP1LQ52LC2 224 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 BOLA3Q53S33 107 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 CASP12Q6UXS9 341 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 OMA1Q96E52 524 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 CRTAMO95727 393 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 ERVK-10P10266 1014 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 CHRM3P20309 590 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 GNA13Q14344 377 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 MLPHQ9BV36 600 aaPredicted RBP16■□□□□ 0.15
HCFC1-201ENST00000310441 PUS3Q9BZE2 481 aaKnown RBP16■□□□□ 0.15
HCFC1-201ENST00000310441 KBTBD13C9JR72 458 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 PTPN7P35236 360 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 TCEAL5Q5H9L2 206 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 NOD2Q9HC29 1040 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 MYL4P12829 197 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 GPC1P35052 558 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 C2CD6Q53TS8 623 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 NARS2Q96I59 477 aaKnown RBP15.99■□□□□ 0.15
HCFC1-201ENST00000310441 C1orf50Q9BV19 199 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 ING3Q9NXR8 418 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 ZBTB1Q9Y2K1 713 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 UBTFL6P0CB48 400 aaPredicted RBP15.99■□□□□ 0.15
HCFC1-201ENST00000310441 UCHL3P15374 230 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 CORO7P57737 925 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 DCAF6Q58WW2 860 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 RSBN1Q5VWQ0 802 aaPredicted RBP15.99■□□□□ 0.15
HCFC1-201ENST00000310441 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 MDM1Q8TC05 714 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 IPPQ9Y573 584 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 IGSF1Q8N6C5 1336 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 PAICSP22234 425 aaKnown RBP15.99■□□□□ 0.15
HCFC1-201ENST00000310441 ATP6V0D2Q8N8Y2 350 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.99■□□□□ 0.15
HCFC1-201ENST00000310441 RNASE11Q8TAA1 199 aaKnown RBP15.99■□□□□ 0.15
HCFC1-201ENST00000310441 VPS51Q9UID3 782 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 MAPRE3Q9UPY8 281 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 TPRKBQ9Y3C4 175 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 NEDD4P46934 1319 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 ZNF335Q9H4Z2 1342 aaPredicted RBP15.99■□□□□ 0.15
HCFC1-201ENST00000310441 PCSK7Q16549 785 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 IPMKQ8NFU5 416 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 TRAPPC9Q96Q05 1148 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.99■□□□□ 0.15
HCFC1-201ENST00000310441 TRPM5Q9NZQ8 1165 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 MAGEB16A2A368 324 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 HSMCR30P0CW71 290 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 NFIL3Q16649 462 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 JAMLQ86YT9 394 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 S100A13Q99584 98 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 GANQ9H2C0 597 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 FEN1P39748 380 aaKnown RBP15.99■□□□□ 0.15
HCFC1-201ENST00000310441 BCAP31P51572 246 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 CCDC153Q494R4 210 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 SGO1Q5FBB7 561 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 MCRS1Q96EZ8 462 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 DSEQ9UL01 958 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 GLI2P10070 1586 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 ERN1O75460 977 aaKnown RBP15.99■□□□□ 0.15
HCFC1-201ENST00000310441 ATP12AP54707 1039 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 GPSM2P81274 684 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 PLEKHF1Q96S99 279 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 TRIM51Q9BSJ1 452 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 TRIM9Q9C026 710 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 PDGFCQ9NRA1 345 aa15.99■□□□□ 0.15
HCFC1-201ENST00000310441 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 LOC102724159A0A0B4J2E5 919 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 PHF20L1A8MW92 1017 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 SLC11A2P49281 568 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 DCTN2Q13561 401 aaKnown RBP15.98■□□□□ 0.15
HCFC1-201ENST00000310441 PWP2Q15269 919 aaKnown RBP15.98■□□□□ 0.15
HCFC1-201ENST00000310441 GALNTL6Q49A17 601 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 OR6J1Q8NGC5 347 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 KCTD14Q9BQ13 255 aaPredicted RBP15.98■□□□□ 0.15
HCFC1-201ENST00000310441 PRMT7Q9NVM4 692 aaPredicted RBP15.98■□□□□ 0.15
HCFC1-201ENST00000310441 MYH13Q9UKX3 1938 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 KDM7AQ6ZMT4 941 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 C4orf33Q8N1A6 199 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 CLPBQ9H078 707 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 KLHL18O94889 574 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 RPN2P04844 631 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 RCVRNP35243 200 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 CYP4A22Q5TCH4 519 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 MFSD4BQ5TF39 518 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 DGUOKQ16854 277 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 ATAD3BQ5T9A4 648 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 ERO1BQ86YB8 467 aa15.98■□□□□ 0.15
HCFC1-201ENST00000310441 MYO1HQ8N1T3 1032 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms