RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CTAGE3PQ8IX95 158 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 OR6J1Q8NGC5 347 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 LENG1Q96BZ8 264 aaPredicted RBP12.08□□□□□ -0.48
PTPN2-201ENST00000309660 HESX1Q9UBX0 185 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 TUBGCP4Q9UGJ1 667 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 PNMA3Q9UL41 463 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 STK38LQ9Y2H1 464 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 KCNN4O15554 427 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 DYNC1LI2O43237 492 aaPredicted RBP12.07□□□□□ -0.48
PTPN2-201ENST00000309660 SMAD1Q15797 465 aaKnown RBP12.07□□□□□ -0.48
PTPN2-201ENST00000309660 TRNP1Q6NT89 227 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 PMF1Q6P1K2 205 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 DRICH1Q6PGQ1 229 aaPredicted RBP12.07□□□□□ -0.48
PTPN2-201ENST00000309660 MAML1Q92585 1016 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 FAF2Q96CS3 445 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 EIF2AQ9BY44 585 aaKnown RBP12.07□□□□□ -0.48
PTPN2-201ENST00000309660 KDM4CQ9H3R0 1056 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 RAB6BQ9NRW1 208 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 KLHL14Q9P2G3 628 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 IKBKGQ9Y6K9 419 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 HMGCRP04035 888 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 GCAP28676 217 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 GPX6P59796 221 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 ITIH4Q14624 930 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 FUKQ8N0W3 1084 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 ATP11CQ8NB49 1132 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 NETO2Q8NC67 525 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 FAM172AQ8WUF8 416 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 CFAP36Q96G28 342 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 C16orf70Q9BSU1 422 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 CNPY3Q9BT09 278 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 LGALS13Q9UHV8 139 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 PTPRFP10586 1907 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 KAT6AQ92794 2004 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 WDR90Q96KV7 1748 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 A8MXQ7 604 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 APOC4-APOC2K7ER74 178 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 ALOX15BO15296 676 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 APOC2P02655 101 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 LCP1P13796 627 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 SDC4P31431 198 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 PHBP35232 272 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 ATXN1P54253 815 aaKnown RBP12.07□□□□□ -0.48
PTPN2-201ENST00000309660 E2F5Q15329 346 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 ICE2Q659A1 982 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 RMDN2Q96LZ7 410 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 ZMAT2Q96NC0 199 aaKnown RBP12.07□□□□□ -0.48
PTPN2-201ENST00000309660 FOXP3Q9BZS1 431 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 CCDC134Q9H6E4 229 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 RSAD1Q9HA92 442 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
PTPN2-201ENST00000309660 CLUHO75153 1309 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 MSH2P43246 934 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 GTF2A1P52655 376 aaPredicted RBP12.06□□□□□ -0.48
PTPN2-201ENST00000309660 ZNF143P52747 638 aaPredicted RBP12.06□□□□□ -0.48
PTPN2-201ENST00000309660 BCAR1P56945 870 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 SPARCL1Q14515 664 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 PPTC7Q8NI37 304 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 LRRC8CQ8TDW0 803 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 TBC1D31Q96DN5 1066 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 PAFAH2Q99487 392 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 MAGEB5Q9BZ81 275 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 DPEP3Q9H4B8 488 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 NXF3Q9H4D5 531 aaKnown RBP12.06□□□□□ -0.48
PTPN2-201ENST00000309660 CYP3A43Q9HB55 503 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 SPON1Q9HCB6 807 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 PSMC3IPQ9P2W1 217 aaPredicted RBP12.06□□□□□ -0.48
PTPN2-201ENST00000309660 APRTP07741 180 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 SMPD1P17405 629 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 ATICP31939 592 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 ELK3P41970 407 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 PCGF5Q86SE9 256 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 FNIP1Q8TF40 1166 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 CLEC4CQ8WTT0 213 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 MCRS1Q96EZ8 462 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 MAGEB18Q96M61 343 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.06□□□□□ -0.482e-6■□□□□ 9.3
PTPN2-201ENST00000309660 ITGA11Q9UKX5 1188 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 NR2E3Q9Y5X4 410 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 PAPPA2Q9BXP8 1791 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 BTBD19C9JJ37 291 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 TCEA3O75764 348 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 ZBED1O96006 694 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 ABHD2P08910 425 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 CCDC130P13994 396 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 YBX3P16989 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTPN2-201ENST00000309660 TFE3P19532 575 aaPredicted RBP12.06□□□□□ -0.48
PTPN2-201ENST00000309660 TAC1P20366 129 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 GEMIN4P57678 1058 aaKnown RBP12.06□□□□□ -0.48
PTPN2-201ENST00000309660 DPYSL3Q14195 570 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 SLC1A5Q15758 541 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 CA9Q16790 459 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 LVRNQ6Q4G3 990 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 FAM149B1Q96BN6 582 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 DHX35Q9H5Z1 703 aaKnown RBP12.06□□□□□ -0.48
PTPN2-201ENST00000309660 ECT2Q9H8V3 914 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 GOLGA2P5Q9HBQ8 144 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 TRIM33Q9UPN9 1127 aa12.06□□□□□ -0.48
PTPN2-201ENST00000309660 ARL2BPQ9Y2Y0 163 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms