RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 FAM111AQ96PZ2 611 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 LBHD1Q9BQE6 289 aaPredicted RBP16.52■□□□□ 0.24
USP42-201ENST00000306177 NAT9Q9BTE0 207 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 FUT8Q9BYC5 575 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 TUT1Q9H6E5 874 aaKnown RBP16.52■□□□□ 0.24
USP42-201ENST00000306177 AAASQ9NRG9 546 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 AP4E1Q9UPM8 1137 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 F5H5T6 163 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 LRG1P02750 347 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 TAGAPQ8N103 731 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 NSL1Q96IY1 281 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 FRMPD4Q14CM0 1322 aa16.52■□□□□ 0.23
USP42-201ENST00000306177 AP5Z1O43299 807 aa16.52■□□□□ 0.23
USP42-201ENST00000306177 HOXA2O43364 376 aa16.52■□□□□ 0.23
USP42-201ENST00000306177 AKAP10O43572 662 aa16.52■□□□□ 0.23
USP42-201ENST00000306177 ARHGAP15Q53QZ3 475 aa16.52■□□□□ 0.23
USP42-201ENST00000306177 ADCK2Q7Z695 626 aa16.52■□□□□ 0.23
USP42-201ENST00000306177 ARID3BQ8IVW6 561 aaPredicted RBP16.52■□□□□ 0.23
USP42-201ENST00000306177 FBXO32Q969P5 355 aa16.52■□□□□ 0.23
USP42-201ENST00000306177 GPATCH2LQ9NWQ4 482 aa16.52■□□□□ 0.23
USP42-201ENST00000306177 TRPC5OSA6NMA1 111 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 C5orf58C9J3I9 102 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 CXCL11O14625 94 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 BST2Q10589 180 aaKnown RBP16.51■□□□□ 0.23
USP42-201ENST00000306177 LRRC23Q53EV4 343 aaPredicted RBP16.51■□□□□ 0.23
USP42-201ENST00000306177 MRNIPQ6NTE8 343 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 GID8Q9NWU2 228 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 CRLS1Q9UJA2 301 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 SOAT2O75908 522 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 MAP3K6O95382 1288 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 UGT3A1Q6NUS8 523 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 PKN3Q6P5Z2 889 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 C16orf87Q6PH81 154 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 PCSK9Q8NBP7 692 aaKnown RBP16.51■□□□□ 0.23
USP42-201ENST00000306177 C3orf20Q8ND61 904 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 DACH2Q96NX9 599 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 APOL5Q9BWW9 433 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 DCDC2Q9UHG0 476 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 ADGRA2Q96PE1 1338 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 C2orf81A6NN90 581 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 SMIM22K7EJ46 135 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 C2CD2LO14523 706 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 SERPIND1P05546 499 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 AGAP9Q5VTM2 703 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 FAM198AQ9UFP1 575 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 ZSCAN9O15535 394 aaPredicted RBP16.51■□□□□ 0.23
USP42-201ENST00000306177 EGFRP00533 1210 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 LY6KQ17RY6 165 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 FBXO47Q5MNV8 452 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 BTNL9Q6UXG8 535 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 PATL1Q86TB9 770 aaKnown RBP16.51■□□□□ 0.23
USP42-201ENST00000306177 RXFP2Q8WXD0 754 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 CPA4Q9UI42 421 aa16.51■□□□□ 0.23
USP42-201ENST00000306177 TIMM44O43615 452 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 KPNA6O60684 536 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 INSRRP14616 1297 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 CDH2P19022 906 aaPredicted RBP16.5■□□□□ 0.23
USP42-201ENST00000306177 KCNK10P57789 538 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 MED21Q13503 144 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 TATDN2Q93075 761 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 LRRC40Q9H9A6 602 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 TMBIM4Q9HC24 238 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 PKD2L2Q9NZM6 624 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 HEATR9A2RTY3 570 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 CCND1P24385 295 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 FBXW10Q5XX13 1052 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 IFNEQ86WN2 208 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 MIB1Q86YT6 1006 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 LRRC34Q8IZ02 419 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 FBXO25Q8TCJ0 367 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 BLOC1S5Q8TDH9 187 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 EME1Q96AY2 570 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 OSMRQ99650 979 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 CDC42EP4Q9H3Q1 356 aaKnown RBP16.5■□□□□ 0.23
USP42-201ENST00000306177 BLOC1S4Q9NUP1 217 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 SYNPO2Q9UMS6 1093 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 ZNF286BP0CG31 522 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 H2AFXP16104 143 aaPredicted RBP16.5■□□□□ 0.23
USP42-201ENST00000306177 SERPINB8P50452 374 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 SKIV2LQ15477 1246 aaKnown RBP16.5■□□□□ 0.23
USP42-201ENST00000306177 MCOLN2Q8IZK6 566 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 ZNF555Q8NEP9 628 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 TMEM121Q9BTD3 319 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 MAP3K7CLP57077 242 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 POU4F1Q01851 419 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 GCNT1Q02742 428 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 FLOT2Q14254 428 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 FAM131BQ86XD5 332 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 EMC1Q8N766 993 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 ILKAPQ9H0C8 392 aaPredicted RBP16.5■□□□□ 0.23
USP42-201ENST00000306177 PHTF1Q9UMS5 762 aa16.5■□□□□ 0.23
USP42-201ENST00000306177 EIF4E1BA6NMX2 242 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 PPP3CCP48454 512 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 UNC45BQ8IWX7 931 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 GPC2Q8N158 579 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 KIF2BQ8N4N8 673 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 DUSP9Q99956 384 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 UBE2OQ9C0C9 1292 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 TRMT6Q9UJA5 497 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 BARX2Q9UMQ3 279 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms