RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 A6NJR5 290 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 DUSP11O75319 330 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 AKAP3O75969 853 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 MAPTP10636 758 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 KRT5P13647 590 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 PLCB3Q01970 1234 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 SNRNP35Q16560 246 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 KBTBD12Q3ZCT8 623 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 AADACL2Q6P093 401 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 TMEM161BQ8NDZ6 487 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 MORC4Q8TE76 937 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 DNAJC1Q96KC8 554 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 NR1H4Q96RI1 486 aaPredicted RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 BTBD10Q9BSF8 475 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 THTPAQ9BU02 230 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 Q9H521 79 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 DHX33Q9H6R0 707 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 KIAA1586Q9HCI6 787 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 THEGQ9P2T0 379 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 NAALADL1Q9UQQ1 740 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 PPME1Q9Y570 386 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 KPNA6O60684 536 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 PGM3O95394 542 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 ITGA2BP08514 1039 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 GRK4P32298 578 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 YARSP54577 528 aaKnown RBP11.38□□□□□ -0.59
LSM3-201ENST00000306024 AP1B1Q10567 949 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 SEZ6Q53EL9 994 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 LMBRD2Q68DH5 695 aaPredicted RBP11.38□□□□□ -0.59
LSM3-201ENST00000306024 SLC26A7Q8TE54 656 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 BSNDQ8WZ55 320 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 PPP2R3CQ969Q6 453 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 RPF1Q9H9Y2 349 aaKnown RBP11.38□□□□□ -0.59
LSM3-201ENST00000306024 ERVK-5Q9HDB9 667 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 RBAKQ9NYW8 714 aaPredicted RBP11.38□□□□□ -0.59
LSM3-201ENST00000306024 ARHGAP10A1A4S6 786 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 H3BRJ5 948 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 DDX3XO00571 662 aaKnown RBP eCLIP11.38□□□□□ -0.59
LSM3-201ENST00000306024 SEPT4O43236 478 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 TNNC2P02585 160 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 ENO1P06733 434 aaKnown RBP11.38□□□□□ -0.59
LSM3-201ENST00000306024 HOXC6P09630 235 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 TAC1P20366 129 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 IRX4P78413 519 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 KDSRQ06136 332 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 CCDC15Q0P6D6 951 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 TMEM259Q4ZIN3 620 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 TWF2Q6IBS0 349 aaKnown RBP11.38□□□□□ -0.59
LSM3-201ENST00000306024 TRIM67Q6ZTA4 783 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 DNAJB3Q8WWF6 145 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 TRIB2Q92519 343 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 SPOCK2Q92563 424 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 MTBPQ96DY7 904 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 CFAP57Q96MR6 1250 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 PCYT2Q99447 389 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 PRMT7Q9NVM4 692 aaPredicted RBP11.38□□□□□ -0.59
LSM3-201ENST00000306024 FLRT1Q9NZU1 646 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.38□□□□□ -0.59
LSM3-201ENST00000306024 ALG6Q9Y672 507 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 SLC16A3O15427 465 aaKnown RBP11.38□□□□□ -0.59
LSM3-201ENST00000306024 ATG7O95352 703 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 SMIM10L2AP0DMW4 78 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 SMIM10L2BP0DMW5 78 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 CAPSQ13938 189 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 ATF7IP2Q5U623 682 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 CBWD2Q8IUF1 395 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 GRK7Q8WTQ7 553 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 UTP4Q969X6 686 aaKnown RBP11.38□□□□□ -0.59
LSM3-201ENST00000306024 TUBGCP5Q96RT8 1024 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 SAYSD1Q9NPB0 183 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 NDUFA13Q9P0J0 144 aa11.38□□□□□ -0.59
LSM3-201ENST00000306024 I3L4J1 428 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 TBX10O75333 385 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 MLH1P40692 756 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 PIK3CAP42336 1068 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 EPHB1P54762 984 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 BPIFB4P59827 614 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 ASPHQ12797 758 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 STAT4Q14765 748 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 GJB7Q6PEY0 223 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 OLFML1Q6UWY5 402 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 TRIM59Q8IWR1 403 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 HACE1Q8IYU2 909 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 NAT14Q8WUY8 206 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 OSMRQ99650 979 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 RNF208Q9H0X6 261 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 C1orf112Q9NSG2 853 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 SH3GLB1Q9Y371 365 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 RBM47A0AV96 593 aaKnown RBP11.37□□□□□ -0.59
LSM3-201ENST00000306024 SPECC1L-ADORA2AF8WAN1 911 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 NDC80O14777 642 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 COILP38432 576 aaPredicted RBP11.37□□□□□ -0.59
LSM3-201ENST00000306024 MAGEA10P43363 369 aaPredicted RBP11.37□□□□□ -0.59
LSM3-201ENST00000306024 GJA8P48165 433 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 CDK7P50613 346 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 GTF2BQ00403 316 aa11.37□□□□□ -0.59
LSM3-201ENST00000306024 BFSP1Q12934 665 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms