RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 SLC5A3P53794 718 aa21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 ADKP55263 362 aaKnown RBP21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 USP46P62068 366 aa21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 MTMR3Q13615 1198 aa21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 SKIV2LQ15477 1246 aaKnown RBP21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 TAF3Q5VWG9 929 aa21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 TRIM72Q6ZMU5 477 aa21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 GPRIN1Q7Z2K8 1008 aa21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 ZNF571Q7Z3V5 609 aaPredicted RBP21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 GPIHBP1Q8IV16 184 aa21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 LEMD2Q8NC56 503 aa21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 PCDHB18PQ96TA0 734 aa21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 SLC4A5Q9BY07 1137 aa21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 IL21Q9HBE4 155 aa21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 SPTBN5Q9NRC6 3674 aaKnown RBP21.14■□□□□ 0.98
SCAMP3-201ENST00000302631 EYSQ5T1H1 3165 aa21.14■□□□□ 0.97
SCAMP3-201ENST00000302631 SPDYE4A6NLX3 237 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 UNGP13051 313 aaPredicted RBP21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 KCNA5P22460 613 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 NOMO3P69849 1222 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 CDK17Q00537 523 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 GOLGA8FQ08AF8 430 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 GOLGA8DPQ0D2H9 430 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 KLHL30Q0D2K2 578 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 LEXMQ3ZCV2 418 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 CES5AQ6NT32 575 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 EP400NLQ6ZTU2 488 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 TMEM110Q86TL2 294 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 SCML4Q8N228 414 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 STKLD1Q8NE28 680 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 ZNF334Q9HCZ1 680 aaPredicted RBP21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 WDR6Q9NNW5 1121 aaKnown RBP21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 HCFC1R1Q9NWW0 138 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 EHD2Q9NZN4 543 aa21.13■□□□□ 0.97
SCAMP3-201ENST00000302631 H3BQ06 376 aaPredicted RBP21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 RHOP08100 348 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 SKILP12757 684 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 MTHFRP42898 656 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 SMAD4Q13485 552 aaKnown RBP21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 PRSS36Q5K4E3 855 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 ATAT1Q5SQI0 421 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 PM20D1Q6GTS8 502 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 GRASPQ7Z6J2 395 aaPredicted RBP21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 HS6ST3Q8IZP7 471 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 TMEM35BQ8NCS4 154 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 SCAMP5Q8TAC9 235 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 SLC30A5Q8TAD4 765 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 APOL5Q9BWW9 433 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 FBXO44Q9H4M3 255 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 ARHGAP20Q9P2F6 1191 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 UXTQ9UBK9 157 aaPredicted RBP21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 MYO16Q9Y6X6 1858 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 NCANO14594 1321 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 GRXCR2A6NFK2 248 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 MBTPS2O43462 519 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 MOSPD3O75425 235 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 F11P03951 625 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 FECHP22830 423 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 PDCLQ13371 301 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 TMEM150AQ86TG1 271 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 PASD1Q8IV76 773 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 C1orf131Q8NDD1 294 aaKnown RBP21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 OVCA2Q8WZ82 227 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 RIPOR3Q96MK2 946 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 CORO1BQ9BR76 489 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 PIDD1Q9HB75 910 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 ASAH2Q9NR71 780 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 CDH22Q9UJ99 828 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 CEP83Q9Y592 693 aa21.12■□□□□ 0.97
SCAMP3-201ENST00000302631 DOCK8Q8NF50 2099 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 FGF19O95750 216 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 ZDHHC11BP0C7U3 371 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 YWHAQP27348 245 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 CCR2P41597 374 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 ACADSBP45954 432 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 GABRB2P47870 512 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 MAPK8IP2Q13387 824 aaPredicted RBP21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 CLEC16AQ2KHT3 1053 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 GAREM2Q75VX8 874 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 CCDC186Q7Z3E2 898 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 NECTIN4Q96NY8 510 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 PDCL3Q9H2J4 239 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 PRDM6Q9NQX0 595 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 SCML2Q9UQR0 700 aa21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 USP15Q9Y4E8 981 aaPredicted RBP21.11■□□□□ 0.97
SCAMP3-201ENST00000302631 SSU72P8A0A1W2PR75 194 aa21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 DDX3XO00571 662 aaKnown RBP eCLIP21.1■□□□□ 0.974e-11■■■■□ 20.8
SCAMP3-201ENST00000302631 TADA3O75528 432 aa21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 PLEKP08567 350 aaPredicted RBP21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 TNFAIP3P21580 790 aa21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 PPP3CCP48454 512 aa21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 RGS7P49802 495 aa21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 NTHL1P78549 312 aa21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 CENPCQ03188 943 aa21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 TAF12Q16514 161 aa21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 TSR1Q2NL82 804 aaKnown RBP21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 ASTE1Q2TB18 679 aaPredicted RBP21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 PABPC1LQ4VXU2 614 aaKnown RBP21.1■□□□□ 0.97
SCAMP3-201ENST00000302631 SNX30Q5VWJ9 437 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms