RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 NT5C1AQ9BXI3 368 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 CEP44Q9C0F1 390 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 EFCAB1Q9HAE3 211 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 IPPQ9Y573 584 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 PDXKO00764 312 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 SLC16A3O15427 465 aaKnown RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 ASS1P00966 412 aaKnown RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 CCT3P49368 545 aaKnown RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 TCEAL5Q5H9L2 206 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 ZNF772Q68DY9 489 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 SCARA3Q6AZY7 606 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 SYTL1Q8IYJ3 562 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 MIEF1Q9NQG6 463 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 DAPK2Q9UIK4 370 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 STK36Q9NRP7 1315 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 TTLL13PA6NNM8 815 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 PSMD14O00487 310 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 ZNF185O15231 689 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 EYA4O95677 639 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 C6orf222P0C671 652 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 FDX1P10109 184 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 PEX5P50542 639 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 RAD23AP54725 363 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 EFHC1Q5JVL4 640 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 ATP6V0D2Q8N8Y2 350 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 OXER1Q8TDS5 423 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 SLC9A7Q96T83 725 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 ROPN1BQ9BZX4 212 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 C6orf62Q9GZU0 229 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 ROPN1Q9HAT0 212 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 GJB4Q9NTQ9 266 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 SPHKAPQ2M3C7 1700 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 NUDT14O95848 222 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 PTPN12Q05209 780 aaKnown RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 VAC14Q08AM6 782 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TAF13Q15543 124 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 ATAD3BQ5T9A4 648 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TDRD10Q5VZ19 366 aaKnown RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 HLA-DQA1Q5Y7H0 255 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 ADGRF4Q8IZF3 695 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 RIN2Q8WYP3 895 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 PP2D1A8MPX8 630 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 OR6A2O95222 327 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TDP2O95551 362 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TGM2P21980 687 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 GALCP54803 685 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 ZNF284Q2VY69 593 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 PLA2G4FQ68DD2 849 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TAF2Q6P1X5 1199 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 CASP12Q6UXS9 341 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 KRT73Q86Y46 540 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 CLYBLQ8N0X4 340 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 OR2W6PQ8NHA6 318 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TMEM143Q96AN5 459 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 GPRASP2Q96D09 838 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 CCDC126Q96EE4 140 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 STRBPQ96SI9 672 aaKnown RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 POLR1BQ9H9Y6 1135 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 IL1RAPL1Q9NZN1 696 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 UTYO14607 1347 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TRIM49D1C9J1S8 452 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 CYP27B1O15528 508 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 CST8O60676 142 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 MED26O95402 600 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 SLC11A2P49281 568 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 CTCFP49711 727 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 HNMTP50135 292 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 ITGA8P53708 1063 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 GEMP55040 296 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 GEMIN4P57678 1058 aaKnown RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 DDR2Q16832 855 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 BNC2Q6ZN30 1099 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 CLEC17AQ6ZS10 378 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TAF8Q7Z7C8 310 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TIPINQ9BVW5 301 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 SNX8Q9Y5X2 465 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 CCT8L1PA6NM43 557 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 F5H6K3 240 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 ECE2O60344 883 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 PDE9AO76083 593 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 MMP10P09238 476 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 ITGA1P56199 1179 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 KLRC3Q07444 240 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 MKRN4PQ13434 485 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 GOLGA7BQ2TAP0 167 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 ESRP1Q6NXG1 681 aaKnown RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 PMF1Q6P1K2 205 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 APLFQ8IW19 511 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 PPIL6Q8IXY8 311 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 FAM120BQ96EK7 910 aaKnown RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 CNPY3Q9BT09 278 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 NFKBIZQ9BYH8 718 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TRPM5Q9NZQ8 1165 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 ARIH1Q9Y4X5 557 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 SF3B1O75533 1304 aaKnown RBP eCLIP10.73□□□□□ -0.691e-10■■■■■ 241.2
CLIP1-201ENST00000302528 DYNC1LI2O43237 492 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 RBP3P10745 1247 aa10.73□□□□□ -0.69
CLIP1-201ENST00000302528 TARSP26639 723 aaKnown RBP10.73□□□□□ -0.69
CLIP1-201ENST00000302528 GRM4Q14833 912 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms