RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 SLC26A9Q7LBE3 791 aa12.6□□□□□ -0.39
TPM3-202ENST00000302206 ARFGAP1Q8N6T3 406 aa12.6□□□□□ -0.39
TPM3-202ENST00000302206 KCTD13Q8WZ19 329 aa12.6□□□□□ -0.39
TPM3-202ENST00000302206 LRRC45Q96CN5 670 aa12.6□□□□□ -0.39
TPM3-202ENST00000302206 PKNOX2Q96KN3 472 aa12.6□□□□□ -0.39
TPM3-202ENST00000302206 DUSP16Q9BY84 665 aa12.6□□□□□ -0.39
TPM3-202ENST00000302206 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
TPM3-202ENST00000302206 PRDM6Q9NQX0 595 aa12.6□□□□□ -0.39
TPM3-202ENST00000302206 CDH9Q9ULB4 789 aa12.6□□□□□ -0.39
TPM3-202ENST00000302206 hCG_1818297A0A087WSY0 165 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 PAPSS1O43252 624 aaPredicted RBP12.59□□□□□ -0.39
TPM3-202ENST00000302206 DAPK3O43293 454 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 TRUB2O95900 331 aaKnown RBP12.59□□□□□ -0.39
TPM3-202ENST00000302206 ODC1P11926 461 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 SELPP16109 830 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 PDGFRAP16234 1089 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 PCSK1P29120 753 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 ADORA2BP29275 332 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 HSPA9P38646 679 aaKnown RBP12.59□□□□□ -0.39
TPM3-202ENST00000302206 CDKN2BP42772 138 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 PTPN9P43378 593 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 RGS7P49802 495 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 LMNB2Q03252 620 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 HLTFQ14527 1009 aaKnown RBP eCLIP12.59□□□□□ -0.39
TPM3-202ENST00000302206 ODF2Q5BJF6 829 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 TFDP3Q5H9I0 405 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 DAB2IPQ5VWQ8 1189 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 DCLRE1AQ6PJP8 1040 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 VSIG1Q86XK7 387 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 CCDC105Q8IYK2 499 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 FUKQ8N0W3 1084 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 CMASQ8NFW8 434 aaPredicted RBP12.59□□□□□ -0.39
TPM3-202ENST00000302206 ATL2Q8NHH9 583 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 SLC2A14Q8TDB8 520 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 TEKT4Q8WW24 435 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 RXFP2Q8WXD0 754 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 HINFPQ9BQA5 517 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 HERPUD2Q9BSE4 406 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 TRIM51Q9BSJ1 452 aa12.59□□□□□ -0.39
TPM3-202ENST00000302206 EYSQ5T1H1 3165 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 C3orf70A6NLC5 250 aaPredicted RBP12.58□□□□□ -0.4
TPM3-202ENST00000302206 ZNF487B1APH4 448 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 M0QZQ0 153 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 TULP2O00295 520 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 HCRTO43612 131 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 GABBR2O75899 941 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 GAS8O95995 478 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 FAM153BP0C7A2 387 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 TCF4P15884 667 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 NPR3P17342 541 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 KDELR1P24390 212 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 MIPP30301 263 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 GJC1P36383 396 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 AFF1P51825 1210 aaKnown RBP12.58□□□□□ -0.4
TPM3-202ENST00000302206 MTMR3Q13615 1198 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 PTK6Q13882 451 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 MBTPS1Q14703 1052 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 TRADDQ15628 312 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 FAM153CQ494X1 144 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 ATP13A4Q4VNC1 1196 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 EFHC1Q5JVL4 640 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 GLB1LQ6UWU2 654 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 MFSD7Q6UXD7 560 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 LRRC8DQ7L1W4 858 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 RTN4RL1Q86UN2 441 aaPredicted RBP12.58□□□□□ -0.4
TPM3-202ENST00000302206 METTL23Q86XA0 190 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 EMC1Q8N766 993 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 TTC13Q8NBP0 860 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 C3orf58Q8NDZ4 430 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 FAM71BQ8TC56 605 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 C1orf54Q8WWF1 131 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 RAPGEF5Q92565 580 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 KHSRPQ92945 711 aaKnown RBP eCLIP12.58□□□□□ -0.4
TPM3-202ENST00000302206 TBCBQ99426 244 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 SYT15Q9BQS2 421 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 ELAC1Q9H777 363 aaKnown RBP12.58□□□□□ -0.4
TPM3-202ENST00000302206 ZDHHC18Q9NUE0 388 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 DDX43Q9NXZ2 648 aaKnown RBP12.58□□□□□ -0.4
TPM3-202ENST00000302206 KANSL3Q9P2N6 904 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 FAM153AQ9UHL3 310 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 OGDHLQ9ULD0 1010 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 USP18Q9UMW8 372 aa12.58□□□□□ -0.4
TPM3-202ENST00000302206 DRG1Q9Y295 367 aaKnown RBP12.58□□□□□ -0.4
TPM3-202ENST00000302206 TDRD15B5MCY1 1934 aaKnown RBP12.57□□□□□ -0.4
TPM3-202ENST00000302206 LRRD1A4D1F6 860 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 CASTOR2A6NHX0 329 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 TMEM189-UBE2V1I3L0A0 370 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 PITPNM1O00562 1244 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 HSF2BPO75031 334 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 ENDOD1O94919 500 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 TYMPP19971 482 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 IL1R2P27930 398 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 SDC4P31431 198 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 FLT3P36888 993 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 CCDC14Q49A88 953 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 TIGD5Q53EQ6 642 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 BOLA3Q53S33 107 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 HSP90B2PQ58FF3 399 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 ZFYVE27Q5T4F4 411 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 TXNRD3NBQ6F5E7 133 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms