RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 CSRNP1Q96S65 589 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 TRIM56Q9BRZ2 755 aaKnown RBP11.44□□□□□ -0.58
SNX20-201ENST00000300590 UGT1A7Q9HAW7 530 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 UGT1A10Q9HAW8 530 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 UGT1A8Q9HAW9 530 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 PTTG2Q9NZH5 202 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 BTBD7Q9P203 1132 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 SPATA31A5Q5VU36 1347 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 SPATA31A6Q5VVP1 1343 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 SPATA31A7Q8IWB4 1347 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 ARFGEF1Q9Y6D6 1849 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 SCN7AQ01118 1682 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 E2F8A0AVK6 867 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 CST8O60676 142 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 MAP3K6O95382 1288 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 STIP1P31948 543 aaKnown RBP11.44□□□□□ -0.58
SNX20-201ENST00000300590 SH3D19Q5HYK7 790 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 MROH9Q5TGP6 573 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 CIAPIN1Q6FI81 312 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 C16orf46Q6P387 395 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 UGT2A3Q6UWM9 527 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 TMC7Q7Z402 723 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 PPIL6Q8IXY8 311 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 RCOR2Q8IZ40 523 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 RNF148Q8N7C7 305 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 FAM213AQ9BRX8 229 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 MAF1Q9H063 256 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 MRPL47Q9HD33 250 aaKnown RBP11.44□□□□□ -0.58
SNX20-201ENST00000300590 UBAP1Q9NZ09 502 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
SNX20-201ENST00000300590 DDX60LQ5H9U9 1706 aaKnown RBP11.44□□□□□ -0.58
SNX20-201ENST00000300590 BRDTQ58F21 947 aaPredicted RBP11.43□□□□□ -0.58
SNX20-201ENST00000300590 VWA5B1Q5TIE3 1220 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 MIER3Q7Z3K6 550 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 UNC45BQ8IWX7 931 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 AGR3Q8TD06 166 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 PRICKLE1Q96MT3 831 aaPredicted RBP11.43□□□□□ -0.58
SNX20-201ENST00000300590 SMCHD1A6NHR9 2005 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 A0A1B0GTW7 788 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 IPO5O00410 1097 aaKnown RBP11.43□□□□□ -0.58
SNX20-201ENST00000300590 HSPA1LP34931 641 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 PDK1Q15118 436 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 ATG16L1Q676U5 607 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 FEZF2Q8TBJ5 459 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 CCDC28BQ9BUN5 200 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 CCDC106Q9BWC9 280 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 GPAMQ9HCL2 828 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 TMEM8AQ9HCN3 771 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 AVENQ9NQS1 362 aaPredicted RBP11.43□□□□□ -0.58
SNX20-201ENST00000300590 XPNPEP1Q9NQW7 623 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 PCSK1NQ9UHG2 260 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 PCDHB2Q9Y5E7 798 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 MAD1L1Q9Y6D9 718 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 ITGB4P16144 1822 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 XPO1O14980 1071 aaKnown RBP11.43□□□□□ -0.58
SNX20-201ENST00000300590 FOXD2O60548 495 aaPredicted RBP11.43□□□□□ -0.58
SNX20-201ENST00000300590 CCDC166P0CW27 439 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 SMIM18P0DKX4 95 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 CIITAP33076 1130 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 FDFT1P37268 417 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 ALDH1A3P47895 512 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 CCR3P51677 355 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 SH3BGRP55822 239 aaPredicted RBP11.43□□□□□ -0.58
SNX20-201ENST00000300590 STX3Q13277 289 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 DCTN2Q13561 401 aaKnown RBP11.43□□□□□ -0.58
SNX20-201ENST00000300590 HNRNPDQ14103 355 aaKnown RBP11.43□□□□□ -0.58
SNX20-201ENST00000300590 PLA2G4FQ68DD2 849 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 NDUFAF2Q8N183 169 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 PPP1R36Q96LQ0 422 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 PCDH9Q9HC56 1237 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 SSU72Q9NP77 194 aaKnown RBP11.43□□□□□ -0.58
SNX20-201ENST00000300590 DOLKQ9UPQ8 538 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 POMPQ9Y244 141 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 COL22A1Q8NFW1 1626 aaPredicted RBP11.43□□□□□ -0.58
SNX20-201ENST00000300590 MAST2Q6P0Q8 1798 aa11.43□□□□□ -0.58
SNX20-201ENST00000300590 UBE4BO95155 1302 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 IRS2Q9Y4H2 1338 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 CXorf49A8MYA2 514 aaPredicted RBP11.42□□□□□ -0.58
SNX20-201ENST00000300590 GNPATO15228 680 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 NDUFB10O96000 172 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 DHRS4L1P0CG22 281 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 SRGAP2CP0DJJ0 459 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 SRGAP2BP0DMP2 458 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 GNA15P30679 374 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 GTF2H1P32780 548 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 COPAP53621 1224 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 OASLQ15646 514 aaKnown RBP11.42□□□□□ -0.58
SNX20-201ENST00000300590 SLC44A4Q53GD3 710 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 WDR44Q5JSH3 913 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 C6orf52Q5T4I8 152 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 ANO5Q75V66 913 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 MON1BQ7L1V2 547 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 AMIGO2Q86SJ2 522 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 CHSY1Q86X52 802 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 GSDMBQ8TAX9 411 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 FAM163AQ96GL9 167 aaPredicted RBP11.42□□□□□ -0.58
SNX20-201ENST00000300590 GGA1Q9UJY5 639 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 DNAJC16Q9Y2G8 782 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 TBC1D30Q9Y2I9 924 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 PCDHAC2Q9Y5I4 1007 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms