RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 TAF5Q15542 800 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 ZBTB41Q5SVQ8 909 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 CIAPIN1Q6FI81 312 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 DHDDSQ86SQ9 333 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 SEPT12Q8IYM1 358 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 KCTD6Q8NC69 237 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 PICK1Q9NRD5 415 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 CHCHD3Q9NX63 227 aaKnown RBP15.29■□□□□ 0.04
COL6A2-201ENST00000300527 STRIP2Q9ULQ0 834 aa15.29■□□□□ 0.04
COL6A2-201ENST00000300527 CAPN8A6NHC0 703 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 CXorf49A8MYA2 514 aaPredicted RBP15.28■□□□□ 0.04
COL6A2-201ENST00000300527 STAM2O75886 525 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 RAG1P15918 1043 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 DNAL1Q4LDG9 190 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 PPP6R3Q5H9R7 873 aaPredicted RBP15.28■□□□□ 0.04
COL6A2-201ENST00000300527 RBM44Q6ZP01 1051 aaKnown RBP15.28■□□□□ 0.04
COL6A2-201ENST00000300527 GRIP2Q9C0E4 1043 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 RAB6BQ9NRW1 208 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 TJP2Q9UDY2 1190 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 H0YIN7 160 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 CDKN2BP42772 138 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 ZNF252P-AS1Q0IIN9 211 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 PDK3Q15120 406 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 ATG16L1Q676U5 607 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 MYLK4Q86YV6 388 aaPredicted RBP15.28■□□□□ 0.04
COL6A2-201ENST00000300527 ZNF606Q8WXB4 792 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 DTNBP1Q96EV8 351 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 COL20A1Q9P218 1284 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 ADAMTS6Q9UKP5 1117 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 ZNRF3Q9ULT6 936 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 COQ4Q9Y3A0 265 aa15.28■□□□□ 0.04
COL6A2-201ENST00000300527 MAGEC1O60732 1142 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 DNAJC6O75061 913 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 VCLP18206 1134 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 RAP1GDS1P52306 607 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 RPL10AP62906 217 aaKnown RBP15.27■□□□□ 0.04
COL6A2-201ENST00000300527 BSPRYQ5W0U4 402 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 PLEKHA7Q6IQ23 1121 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 C12orf56Q8IXR9 622 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 SPATA18Q8TC71 538 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 CNBD2Q96M20 576 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 S100A14Q9HCY8 104 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 SNCAIPQ9Y6H5 919 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 PTPRJQ12913 1337 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 NHSQ6T4R5 1651 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 PTP4A2Q12974 167 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 STX3Q13277 289 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 R3HDM1Q15032 1099 aaKnown RBP15.27■□□□□ 0.04
COL6A2-201ENST00000300527 PCGF5Q86SE9 256 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 HPS6Q86YV9 775 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 RIT2Q99578 217 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 TCHPQ9BT92 498 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 KLHL4Q9C0H6 718 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 C20orf27Q9GZN8 174 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 DNAJC16Q9Y2G8 782 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 NUB1Q9Y5A7 615 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 HEY1Q9Y5J3 304 aa15.27■□□□□ 0.04
COL6A2-201ENST00000300527 MCF2LO15068 1137 aa15.27■□□□□ 0.03
COL6A2-201ENST00000300527 MMRN1Q13201 1228 aa15.27■□□□□ 0.03
COL6A2-201ENST00000300527 VWA5B1Q5TIE3 1220 aa15.27■□□□□ 0.03
COL6A2-201ENST00000300527 GPAT2Q6NUI2 795 aa15.27■□□□□ 0.03
COL6A2-201ENST00000300527 PAOXQ6QHF9 649 aa15.27■□□□□ 0.03
COL6A2-201ENST00000300527 ENOSF1Q7L5Y1 443 aa15.27■□□□□ 0.03
COL6A2-201ENST00000300527 GALNT4Q8N4A0 578 aa15.27■□□□□ 0.03
COL6A2-201ENST00000300527 DNAAF2Q9NVR5 837 aaKnown RBP15.27■□□□□ 0.03
COL6A2-201ENST00000300527 PIH1D1Q9NWS0 290 aaKnown RBP15.27■□□□□ 0.03
COL6A2-201ENST00000300527 TMOD2Q9NZR1 351 aa15.27■□□□□ 0.03
COL6A2-201ENST00000300527 SEPT9Q9UHD8 586 aaPredicted RBP15.27■□□□□ 0.03
COL6A2-201ENST00000300527 SOX13Q9UN79 622 aa15.27■□□□□ 0.03
COL6A2-201ENST00000300527 COMMD3-BMI1R4GMX3 469 aa15.27■□□□□ 0.03
COL6A2-201ENST00000300527 ASTN2O75129 1339 aaPredicted RBP15.27■□□□□ 0.03
COL6A2-201ENST00000300527 TMEM191CA6NGB0 347 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 ADCY3O60266 1144 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 KRT37O76014 449 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 ITGAVP06756 1048 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 TMEM191BP0C7N4 346 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 KCNA4P22459 653 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 ETV4P43268 484 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 CDO1Q16878 200 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 HSF5Q4G112 596 aaPredicted RBP15.26■□□□□ 0.03
COL6A2-201ENST00000300527 ZC3H12AQ5D1E8 599 aaKnown RBP15.26■□□□□ 0.03
COL6A2-201ENST00000300527 CES4AQ5XG92 561 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 MAP4K3Q8IVH8 894 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 DEFB107AQ8IZN7 70 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 NAT8LQ8N9F0 302 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 ICA1LQ8NDH6 482 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 GMCL1P1Q8NEA9 526 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 MZB1Q8WU39 189 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 PRPF31Q8WWY3 499 aaKnown RBP15.26■□□□□ 0.03
COL6A2-201ENST00000300527 KCNK4Q9NYG8 393 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 ZC3H7BQ9UGR2 993 aaKnown RBP15.26■□□□□ 0.03
COL6A2-201ENST00000300527 LRRIQ4A6NIV6 560 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 APRTP07741 180 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 RFC1P35251 1148 aaPredicted RBP15.26■□□□□ 0.03
COL6A2-201ENST00000300527 LSAMPQ13449 338 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 TKFCQ3LXA3 575 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 MTERF2Q49AM1 385 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 CASC4Q6P4E1 433 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 RNF148Q8N7C7 305 aa15.26■□□□□ 0.03
COL6A2-201ENST00000300527 TMC2Q8TDI7 906 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms