RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 CKMP06732 381 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 GJB1P08034 283 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 NAPEPLDQ6IQ20 393 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 FBXO46Q6PJ61 603 aaPredicted RBP8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 DLK2Q6UY11 383 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 MMGT1Q8N4V1 131 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 CEP120Q8N960 986 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 B3GALNT2Q8NCR0 500 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 PPHLN1Q8NEY8 458 aaKnown RBP8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 MS4A4AQ96JQ5 239 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 KCND1Q9NSA2 647 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 POC1B-GALNT4F8VUJ3 575 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 TTI1O43156 1089 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 EPHB2P29323 1055 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 NOS2P35228 1153 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 ARSEP51690 589 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 RAPH1Q70E73 1250 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 TRMT10CQ7L0Y3 403 aaKnown RBP8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 SLC2A14Q8TDB8 520 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 ACTRT1Q8TDG2 376 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 RXFP2Q8WXD0 754 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 ASIC4Q96FT7 647 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 TRIM56Q9BRZ2 755 aaKnown RBP8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 TSSK1BQ9BXA7 367 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 MUC3BQ9H195 1237 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 XAB2Q9HCS7 855 aaKnown RBP8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 CLUHO75153 1309 aa8.66□□□□□ -1.02
SNRPD1-201ENST00000300413 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 CST8O60676 142 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 GMNNO75496 209 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 TAPT1Q6NXT6 567 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 CALML6Q8TD86 181 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 ARHGAP39Q9C0H5 1083 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 DDX47Q9H0S4 455 aaKnown RBP8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 FAM96AQ9H5X1 160 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 ZMYM5Q9UJ78 669 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 BRWD3Q6RI45 1802 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 KCNN4O15554 427 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 ARIH2O95376 493 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 LTFP02788 710 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 CLTBP09497 229 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 NR2C2P49116 596 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 RENBPP51606 427 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 GEMP55040 296 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 GABPB1Q06547 395 aaPredicted RBP8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 CDH18Q13634 790 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 CNKSR3Q6P9H4 555 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 LRRC49Q8IUZ0 686 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 ARHGAP24Q8N264 748 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 TFB1MQ8WVM0 346 aaKnown RBP8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 NAT9Q9BTE0 207 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 CNGB3Q9NQW8 809 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 USP18Q9UMW8 372 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 AP4E1Q9UPM8 1137 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 RBP3P10745 1247 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 TAC1P20366 129 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 GLUD2P49448 558 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 STAT4Q14765 748 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 TRIP13Q15645 432 aaPredicted RBP8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 HIF1AQ16665 826 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 SLC39A12Q504Y0 691 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 PAPD7Q5XG87 772 aaKnown RBP8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 WSCD1Q658N2 575 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 IL31Q6EBC2 164 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 RPRD1AQ96P16 312 aaPredicted RBP8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 TMEM175Q9BSA9 504 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 TTPALQ9BTX7 342 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 NXF3Q9H4D5 531 aaKnown RBP8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 TPX2Q9ULW0 747 aaKnown RBP8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 VPS9D1Q9Y2B5 631 aa8.65□□□□□ -1.02
SNRPD1-201ENST00000300413 SIGLEC16A6NMB1 481 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 NEMP1O14524 444 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 NDUFAB1O14561 156 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 ZNF197O14709 1029 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 XPO1O14980 1071 aaKnown RBP8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 CNMDO75829 334 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 DNAJB2P25686 324 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 SSTR3P32745 418 aaPredicted RBP8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 CTNNB1P35222 781 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 PDCLQ13371 301 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 PSMD5Q16401 504 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 NYAP1Q6ZVC0 841 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 REXO1L1PQ8IX06 675 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 GLIS3Q8NEA6 775 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 SLC20A1Q8WUM9 679 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 WDR24Q96S15 920 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 ZMYND15Q9H091 742 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 AAR2Q9Y312 384 aaKnown RBP8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 COQ4Q9Y3A0 265 aa8.65□□□□□ -1.03
SNRPD1-201ENST00000300413 SLC12A8A0AV02 714 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 GRAP2O75791 330 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 C4BPAP04003 597 aaKnown RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 OAS2P29728 719 aaKnown RBP8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 TNFSF9P41273 254 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 IFNAR2P48551 515 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 TBX4P57082 545 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 PRAMEP78395 509 aa8.64□□□□□ -1.03
SNRPD1-201ENST00000300413 ACCSLQ4AC99 568 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms