RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RUNX1T1Q06455 604 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FAM83EQ2M2I3 478 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FAM151AQ8WW52 585 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RNF19AQ9NV58 838 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ABCB1P08183 1280 aaPredicted RBP14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 BGNP21810 368 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FNTAP49354 379 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 C3orf67Q6ZVT6 689 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TRIM69Q86WT6 500 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ADGRF2Q8IZF7 708 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FBXO32Q969P5 355 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 VIPAS39Q9H9C1 493 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 KCND2Q9NZV8 630 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SOAT2O75908 522 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ZNF682O95780 498 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FAM107AO95990 144 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 REXO1L1PQ8IX06 675 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 B3GALNT2Q8NCR0 500 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CELF6Q96J87 481 aaKnown RBP14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SNX13Q9Y5W8 968 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 MED14O60244 1454 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 F5H5T6 163 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 GSSP48637 474 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DSG1Q02413 1049 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 HIST2H2ACQ16777 129 aaPredicted RBP14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 HIST2H2AA3Q6FI13 130 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DENND1BQ6P3S1 775 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FAM131BQ86XD5 332 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CACUL1Q86Y37 369 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ANKRD49Q8WVL7 239 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TET3O43151 1660 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 A8MX80 341 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 KATNA1O75449 491 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ATP6V1B2P21281 511 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ISLR2Q6UXK2 745 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 HEATR4Q86WZ0 1026 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CCDC103Q8IW40 242 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 KIRREL3Q8IZU9 778 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PPP1R13LQ8WUF5 828 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NUDT12Q9BQG2 462 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NFKBIL1Q9UBC1 381 aaPredicted RBP14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DNAJC16Q9Y2G8 782 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CAPN6Q9Y6Q1 641 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 C2orf81A6NN90 581 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TSPAN3O60637 253 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ENTPD3O75355 529 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TPH1P17752 444 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CYP11B2P19099 503 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CCND1P24385 295 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 KCNMA1Q12791 1236 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 LAMC2Q13753 1193 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CSHL1Q14406 222 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 HHIPL2Q6UWX4 724 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FGD2Q7Z6J4 655 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NT5DC3Q86UY8 548 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NT5MQ9NPB1 228 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SNX8Q9Y5X2 465 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 STRA8Q7Z7C7 330 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 UNC45BQ8IWX7 931 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 GLMNQ92990 594 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TBC1D23Q9NUY8 699 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 EIF3LQ9Y262 564 aaKnown RBP14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DARSP14868 501 aaKnown RBP14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FGFR2P21802 821 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 GPC1P35052 558 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 HERVK_113P62684 666 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CDC42EP1Q00587 391 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TP53BP2Q13625 1128 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ARHGAP15Q53QZ3 475 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TRIM65Q6PJ69 517 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DEFB128Q7Z7B8 93 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PRUNE1Q86TP1 453 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NOD2Q9HC29 1040 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 GPRC5DQ9NZD1 345 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CFAP99D6REC4 459 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 H0YC42 278 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 STAG3L1P0CL83 205 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 BBS7Q8IWZ6 715 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 MED8Q96G25 268 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ROPN1BQ9BZX4 212 aaPredicted RBP14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SEMA6BQ9H3T3 888 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ROPN1Q9HAT0 212 aaPredicted RBP14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 UTP6Q9NYH9 597 aaKnown RBP14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CROCC2H7BZ55 1655 aa14.03□□□□□ -0.16
CHRFAM7A-201ENST00000299847 STAU1O95793 577 aaKnown RBP14.02□□□□□ -0.16
CHRFAM7A-201ENST00000299847 EDEM1Q92611 657 aa14.02□□□□□ -0.16
CHRFAM7A-201ENST00000299847 MTERF3Q96E29 417 aa14.02□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ILKAPQ9H0C8 392 aaPredicted RBP14.02□□□□□ -0.16
CHRFAM7A-201ENST00000299847 OSGEPL1Q9H4B0 414 aa14.02□□□□□ -0.16
CHRFAM7A-201ENST00000299847 IMPAD1Q9NX62 359 aa14.02□□□□□ -0.16
CHRFAM7A-201ENST00000299847 H2AFYO75367 372 aaKnown RBP14.02□□□□□ -0.16
CHRFAM7A-201ENST00000299847 GCLCP48506 637 aaPredicted RBP14.02□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TRIM25Q14258 630 aaKnown RBP14.02□□□□□ -0.16
CHRFAM7A-201ENST00000299847 WLSQ5T9L3 541 aa14.02□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ZNF333Q96JL9 665 aa14.02□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TRPC5OSA6NMA1 111 aa14.02□□□□□ -0.17
CHRFAM7A-201ENST00000299847 HSMCR30P0CW71 290 aa14.02□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CYP11B1P15538 503 aa14.02□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PSMA4P25789 261 aaKnown RBP14.02□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RPL10AP62906 217 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms