RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 R3HDMLQ9H3Y0 253 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 GINS2Q9Y248 185 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 CHKBQ9Y259 395 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 HEY1Q9Y5J3 304 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 F5H423 210 aaPredicted RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 ALOX15BO15296 676 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 NPTXRO95502 500 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 TPBGLP0DKB5 382 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 GEMIN4P57678 1058 aaKnown RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 OASLQ15646 514 aaKnown RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 ZNF667Q5HYK9 610 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 FAM102AQ5T9C2 384 aaPredicted RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 WDR49Q8IV35 697 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 SEPT1Q8WYJ6 367 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 CPT1BQ92523 772 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 CFAP36Q96G28 342 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 PCDH9Q9HC56 1237 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 GGA3Q9NZ52 723 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 SLC17A7Q9P2U7 560 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 PRKAG3Q9UGI9 489 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 CYTH4Q9UIA0 394 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 SCOCQ9UIL1 159 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 KIAA1217Q5T5P2 1943 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 M0QYV0 167 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 FARP2O94887 1054 aaPredicted RBP14.04□□□□□ -0.16
CTDP1-202ENST00000299543 UNC5CO95185 931 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 EPHB2P29323 1055 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 PHBP35232 272 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 RGS7P49802 495 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 MCL1Q07820 350 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 RAB6CQ53S08 254 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 TREML2Q5T2D2 321 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 ISLR2Q6UXK2 745 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 MTDHQ86UE4 582 aaKnown RBP14.04□□□□□ -0.16
CTDP1-202ENST00000299543 ZNF75CPQ92670 426 aaPredicted RBP14.04□□□□□ -0.16
CTDP1-202ENST00000299543 COPS5Q92905 334 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 GRAMD1AQ96CP6 724 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 RAB6CQ9H0N0 254 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 DDX56Q9NY93 547 aaKnown RBP14.04□□□□□ -0.16
CTDP1-202ENST00000299543 HMGXB4Q9UGU5 601 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 CCDC160A6NGH7 325 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 MSCO60682 206 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 MT-ND3P03897 115 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 ATP6V1C1P21283 382 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 ABCD1P33897 745 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 CDH6P55285 790 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 TAF1BQ53T94 588 aaPredicted RBP14.04□□□□□ -0.16
CTDP1-202ENST00000299543 OR6B2Q6IFH4 312 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 ATP11CQ8NB49 1132 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 ACO2Q99798 780 aaKnown RBP14.04□□□□□ -0.16
CTDP1-202ENST00000299543 SMYD3Q9H7B4 428 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 TXLNGQ9NUQ3 528 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 GPATCH2LQ9NWQ4 482 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 LOXHD1Q8IVV2 1947 aa14.04□□□□□ -0.16
CTDP1-202ENST00000299543 MCF2LO15068 1137 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 ITGB3P05106 788 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 KDELR1P24390 212 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 GSTT1P30711 240 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 NR1H3Q13133 447 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 FYB2Q5VWT5 728 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 OTOAQ7RTW8 1153 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 PPIL6Q8IXY8 311 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 RIBC1Q8N443 379 aaPredicted RBP14.03□□□□□ -0.16
CTDP1-202ENST00000299543 DNAJC9Q8WXX5 260 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 RNPEPL1Q9HAU8 725 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 RNF19AQ9NV58 838 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 SMG5Q9UPR3 1016 aaKnown RBP14.03□□□□□ -0.16
CTDP1-202ENST00000299543 CLUHO75153 1309 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 ADGRA2Q96PE1 1338 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 CFAP69A5D8W1 941 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 HNRNPRO43390 633 aaKnown RBP14.03□□□□□ -0.16
CTDP1-202ENST00000299543 KRT7P08729 469 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 ABHD2P08910 425 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 FGFR1P11362 822 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 MIPP30301 263 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 USP46P62068 366 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 MRPS35P82673 323 aaKnown RBP14.03□□□□□ -0.16
CTDP1-202ENST00000299543 ATF7IP2Q5U623 682 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 RNF43Q68DV7 783 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 APBB1IPQ7Z5R6 666 aaPredicted RBP14.03□□□□□ -0.16
CTDP1-202ENST00000299543 ARFGAP1Q8N6T3 406 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 ADPGKQ9BRR6 497 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 RPF1Q9H9Y2 349 aaKnown RBP14.03□□□□□ -0.16
CTDP1-202ENST00000299543 ZFP69BQ9UJL9 534 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 DRG1Q9Y295 367 aaKnown RBP14.03□□□□□ -0.16
CTDP1-202ENST00000299543 C2orf71A6NGG8 1288 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 C19orf81C9J6K1 198 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 TMEM63AO94886 807 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 YWHAEP62258 255 aaKnown RBP14.03□□□□□ -0.16
CTDP1-202ENST00000299543 C15orf59Q2T9L4 293 aaPredicted RBP14.03□□□□□ -0.16
CTDP1-202ENST00000299543 RFWD3Q6PCD5 774 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 ASRGL1Q7L266 308 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 LRRC6Q86X45 466 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 TRIM42Q8IWZ5 723 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 FAM13CQ8NE31 585 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 TRPM4Q8TD43 1214 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 TWNKQ96RR1 684 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 FOXP3Q9BZS1 431 aa14.03□□□□□ -0.16
CTDP1-202ENST00000299543 NGRNQ9NPE2 291 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms