RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 MYOCOSA0A1B0GUC4 107 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 PLSCR1O15162 318 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 ATP6V1G1O75348 118 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 CLPTM1O96005 669 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 NCF2P19878 526 aaPredicted RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 NPTX2P47972 431 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 MSLNQ13421 630 aaPredicted RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 FAM182BQ5T319 152 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 PLEKHA7Q6IQ23 1121 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 IYDQ6PHW0 289 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 TRIM42Q8IWZ5 723 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 MIPOL1Q8TD10 442 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 AGBL1Q96MI9 1066 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 MMP19Q99542 508 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 PICK1Q9NRD5 415 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 KCNH7Q9NS40 1196 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 A0A088AWK7 358 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 NDC80O14777 642 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 KRT37O76014 449 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 TOP3BO95985 862 aaKnown RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 DHRS4L1P0CG22 281 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 SETSIPP0DME0 302 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 STIP1P31948 543 aaKnown RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 GALK1P51570 392 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 FOLH1Q04609 750 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 STX3Q13277 289 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 UGCGQ16739 394 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 PRR5LQ6MZQ0 368 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 APOBEC3HQ6NTF7 200 aaKnown RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 ZNF677Q86XU0 584 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 MAP7D3Q8IWC1 876 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 SEPT12Q8IYM1 358 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 GPD1LQ8N335 351 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 NAT8LQ8N9F0 302 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 PRPF31Q8WWY3 499 aaKnown RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 CALN1Q9BXU9 219 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 TMOD2Q9NZR1 351 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 DTNAQ9Y4J8 743 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 CNTNAP4Q9C0A0 1308 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 SMIM31A0A1B0GVY4 71 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 ADCY3O60266 1144 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 LYPLA1O75608 230 aaPredicted RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 PENKP01210 267 aaPredicted RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 ITGB5P18084 799 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 PMLP29590 882 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 HSPA1LP34931 641 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 CDKN2BP42772 138 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 CRKP46108 304 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 ATXN3P54252 364 aaPredicted RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 EIF3EP60228 445 aaKnown RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 OGDHQ02218 1023 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 HSF5Q4G112 596 aaPredicted RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 MROH9Q5TGP6 573 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 NDUFAF2Q8N183 169 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 SLC44A1Q8WWI5 657 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 NKD2Q969F2 451 aaPredicted RBP10.69□□□□□ -0.7
LMX1A-201ENST00000294816 FAF2Q96CS3 445 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 CNBD2Q96M20 576 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 ZNRF3Q9ULT6 936 aa10.69□□□□□ -0.7
LMX1A-201ENST00000294816 MYCLP12524 364 aaPredicted RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 PSMA2P25787 234 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 RGS2P41220 211 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 JAG1P78504 1218 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 ANKRD20A4Q4UJ75 823 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 TTC39BQ5VTQ0 682 aaPredicted RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 DRICH1Q6PGQ1 229 aaPredicted RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 DARS2Q6PI48 645 aaKnown RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 HPS6Q86YV9 775 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 DEFB107AQ8IZN7 70 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 TMEM161BQ8NDZ6 487 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 TMC2Q8TDI7 906 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 HSPH1Q92598 858 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 ZNF516Q92618 1163 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 DGCR14Q96DF8 476 aaKnown RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 CLMNQ96JQ2 1002 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 MXRA8Q9BRK3 442 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 DHRS4Q9BTZ2 278 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 DNAJC16Q9Y2G8 782 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 INPP5FQ9Y2H2 1132 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 MAD1L1Q9Y6D9 718 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 ZSCAN9O15535 394 aaPredicted RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 UGT1A9O60656 530 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 SNRPAP09012 282 aaKnown RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 MAPTP10636 758 aaKnown RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 RBP3P10745 1247 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 COPAP53621 1224 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 TRAPPC3LQ5T215 181 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 B3GNT6Q6ZMB0 384 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 RNF111Q6ZNA4 994 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 GMCL1Q96IK5 515 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 CCDC106Q9BWC9 280 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 UGT1A7Q9HAW7 530 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 UGT1A10Q9HAW8 530 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 UGT1A8Q9HAW9 530 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 SLC9A2Q9UBY0 812 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 APOBEC2Q9Y235 224 aaKnown RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 HBS1LQ9Y450 684 aaKnown RBP10.68□□□□□ -0.7
LMX1A-201ENST00000294816 TMEM191CA6NGB0 347 aa10.68□□□□□ -0.7
LMX1A-201ENST00000294816 PMM2O15305 246 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms