RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 HESX1Q9UBX0 185 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 DRG1Q9Y295 367 aaKnown RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 TNPO2O14787 897 aaKnown RBP19.97■□□□□ 0.79
SHF-201ENST00000290894 CTGFP29279 349 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 ATXN1P54253 815 aaKnown RBP19.97■□□□□ 0.79
SHF-201ENST00000290894 UBXN11Q5T124 520 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 ANKMY2Q8IV38 441 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 HOMEZQ8IX15 550 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 ZBED8Q8IZ13 594 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 SPATA18Q8TC71 538 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 KBTBD7Q8WVZ9 684 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 RSAD2Q8WXG1 361 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 XPO6Q96QU8 1125 aaKnown RBP19.97■□□□□ 0.79
SHF-201ENST00000290894 PRMT1Q99873 361 aaKnown RBP19.97■□□□□ 0.79
SHF-201ENST00000290894 IPPQ9Y573 584 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 C17orf102A2RUQ5 167 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 KPNA7A9QM74 516 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 PRPSAP2O60256 369 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 LCP1P13796 627 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 PKDCCQ504Y2 493 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 C1orf228Q6PIY5 440 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 APBB1IPQ7Z5R6 666 aaPredicted RBP19.97■□□□□ 0.79
SHF-201ENST00000290894 FAM172AQ8WUF8 416 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 SLC35F5Q8WV83 523 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 TSPYL1Q9H0U9 437 aa19.97■□□□□ 0.79
SHF-201ENST00000290894 CNOT10Q9H9A5 744 aaKnown RBP19.97■□□□□ 0.79
SHF-201ENST00000290894 UBQLN1Q9UMX0 589 aaKnown RBP19.97■□□□□ 0.79
SHF-201ENST00000290894 CTCFP49711 727 aaPredicted RBP19.96■□□□□ 0.79
SHF-201ENST00000290894 EIF3EP60228 445 aaKnown RBP19.96■□□□□ 0.79
SHF-201ENST00000290894 RNASEH2BQ5TBB1 312 aaKnown RBP19.96■□□□□ 0.79
SHF-201ENST00000290894 CCDC33Q8N5R6 958 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 NDRG1Q92597 394 aaKnown RBP19.96■□□□□ 0.79
SHF-201ENST00000290894 KHSRPQ92945 711 aaKnown RBP eCLIP19.96■□□□□ 0.79
SHF-201ENST00000290894 INTS9Q9NV88 658 aaKnown RBP19.96■□□□□ 0.79
SHF-201ENST00000290894 KIAA1257Q9ULG3 409 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 DERAQ9Y315 318 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 HAS3O00219 553 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 ATP2C2O75185 946 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 CTSHP09668 335 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 CHRM1P11229 460 aaPredicted RBP19.96■□□□□ 0.79
SHF-201ENST00000290894 GNL1P36915 607 aaPredicted RBP19.96■□□□□ 0.79
SHF-201ENST00000290894 CA9Q16790 459 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 TNFAIP8L3Q5GJ75 292 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 PPP6R3Q5H9R7 873 aaPredicted RBP19.96■□□□□ 0.79
SHF-201ENST00000290894 ERMARDQ5T6L9 678 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 MFSD5Q6N075 450 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 CCDC13Q8IYE1 715 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 MAK16Q9BXY0 300 aaKnown RBP19.96■□□□□ 0.79
SHF-201ENST00000290894 ROPN1BQ9BZX4 212 aaPredicted RBP19.96■□□□□ 0.79
SHF-201ENST00000290894 ROPN1Q9HAT0 212 aaPredicted RBP19.96■□□□□ 0.79
SHF-201ENST00000290894 PCDH9Q9HC56 1237 aa19.96■□□□□ 0.79
SHF-201ENST00000290894 TCRBV7S3A2A0A539 114 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 RBP3P10745 1247 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 AFF1P51825 1210 aaKnown RBP19.95■□□□□ 0.78
SHF-201ENST00000290894 C17orf99Q6UX52 265 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 CXCL17Q6UXB2 119 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 LRRC52Q8N7C0 313 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 ANKRD42Q8N9B4 389 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 SMG8Q8ND04 991 aaKnown RBP19.95■□□□□ 0.78
SHF-201ENST00000290894 SLC2A14Q8TDB8 520 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 ATXN2LQ8WWM7 1075 aaKnown RBP19.95■□□□□ 0.78
SHF-201ENST00000290894 USP6NLQ92738 828 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 KCNK9Q9NPC2 374 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 HEY1Q9Y5J3 304 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 RALGAPA2Q2PPJ7 1873 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 PIRO00625 290 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 PGK1P00558 417 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 ACAT1P24752 427 aaKnown RBP19.95■□□□□ 0.78
SHF-201ENST00000290894 RPL22P35268 128 aaKnown RBP19.95■□□□□ 0.78
SHF-201ENST00000290894 PURAQ00577 322 aaKnown RBP19.95■□□□□ 0.78
SHF-201ENST00000290894 CDC42EP1Q00587 391 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 SLC6A3Q01959 620 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 PDIA2Q13087 525 aaKnown RBP19.95■□□□□ 0.78
SHF-201ENST00000290894 DPYSL3Q14195 570 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 KRT81Q14533 505 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 CCHCR1Q8TD31 782 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 PRCCQ92733 491 aaPredicted RBP19.95■□□□□ 0.78
SHF-201ENST00000290894 SERPINB12Q96P63 405 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 VPS37BQ9H9H4 285 aa19.95■□□□□ 0.78
SHF-201ENST00000290894 SDC4P31431 198 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 PCK1P35558 622 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 RGS2P41220 211 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 TAZQ16635 292 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 TAX1BP1Q86VP1 789 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 SRRM1Q8IYB3 904 aaKnown RBP19.94■□□□□ 0.78
SHF-201ENST00000290894 TTC39CQ8N584 583 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 ZIC5Q96T25 663 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 SLC4A5Q9BY07 1137 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 ARHGAP39Q9C0H5 1083 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 NAALADL1Q9UQQ1 740 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 TMEM120BA0PK00 339 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 POC1B-GALNT4F8VUJ3 575 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 APOC4-APOC2K7ER74 178 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 APOC2P02655 101 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 RABGGTBP53611 331 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 BASP1P80723 227 aaKnown RBP19.94■□□□□ 0.78
SHF-201ENST00000290894 CRHR2Q13324 411 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 MSS51Q4VC12 460 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 GNASQ5JWF2 1037 aa19.94■□□□□ 0.78
SHF-201ENST00000290894 CPLX4Q7Z7G2 160 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms