RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 OTOP1Q7RTM1 612 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 TMC7Q7Z402 723 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 TTC13Q8NBP0 860 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 ALKBH8Q96BT7 664 aaKnown RBP11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 INTS2Q9H0H0 1204 aaKnown RBP11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 KLHL25Q9H0H3 589 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 GIMAP4Q9NUV9 329 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 CORO1CQ9ULV4 474 aaPredicted RBP11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 AURKCQ9UQB9 309 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 CNTNAP1P78357 1384 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 XIRP1Q702N8 1843 aaKnown RBP11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 CALB1P05937 261 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 PTPN4P29074 926 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 MAGEA4P43358 317 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 STX3Q13277 289 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 P3H1Q32P28 736 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 ZNF394Q53GI3 561 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 BTBD8Q5XKL5 378 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 LRRC8EQ6NSJ5 796 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 DLK2Q6UY11 383 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 RAB44Q7Z6P3 723 aaPredicted RBP11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 CDR2LQ86X02 465 aaPredicted RBP11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 PASD1Q8IV76 773 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 RHOT1Q8IXI2 618 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 RYBPQ8N488 228 aaPredicted RBP11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 COPS5Q92905 334 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 PKD2L2Q9NZM6 624 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 ABCA3Q99758 1704 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 COL1A2P08123 1366 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 M0QYV0 167 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 CYBBP04839 570 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 KRT4P19013 534 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 ADORA2BP29275 332 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 KPNA2P52292 529 aaKnown RBP11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 EFTUD2Q15029 972 aaKnown RBP eCLIP11.82□□□□□ -0.521e-6■■■■□ 21.1
NPC1L1-201ENST00000289547 EDRF1Q3B7T1 1238 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 DDI1Q8WTU0 396 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 RMI1Q9H9A7 625 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 WDR70Q9NW82 654 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 NEU2Q9Y3R4 380 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 ITGB4P16144 1822 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 F8VZ95 297 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 FOXP2O15409 715 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 PRPSAP2O60256 369 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 PSMA2P25787 234 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 SERPINB1P30740 379 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 ITGA8P53708 1063 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 ADARP55265 1226 aaKnown RBP11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 MAPK7Q13164 816 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 TAF1BQ53T94 588 aaPredicted RBP11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 WASHC2DQ5SRD0 308 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 LDLRAD1Q5T700 205 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 SLC27A1Q6PCB7 646 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 ARMCX6Q7L4S7 300 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 MAGEB18Q96M61 343 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 MANSC1Q9H8J5 431 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 ABCF3Q9NUQ8 709 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 UTP6Q9NYH9 597 aaKnown RBP11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 GTSE1Q9NYZ3 720 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 IGKV6D-41A0A0C4DH26 115 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 AIM2O14862 343 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 GSTT1P30711 240 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 RECQLP46063 649 aaPredicted RBP11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 SERPINB10P48595 397 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 SERPINB8P50452 374 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 SYDE1Q6ZW31 735 aaPredicted RBP11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 MTDHQ86UE4 582 aaKnown RBP11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 HSPH1Q92598 858 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 APBB2Q92870 758 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 TMEM237Q96Q45 408 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 AGPAT1Q99943 283 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 MKNK1Q9BUB5 465 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 ADNPQ9H2P0 1102 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 ALG6Q9Y672 507 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 MEIS2O14770 477 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 PFDN6O15212 129 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 MAPTP10636 758 aaKnown RBP11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 LBX1P52954 281 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 KCNA10Q16322 511 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 ZBTB41Q5SVQ8 909 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 ARID3BQ8IVW6 561 aaPredicted RBP11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 C7orf61Q8IZ16 206 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 SCG3Q8WXD2 468 aaKnown RBP11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 SEPT5Q99719 369 aaPredicted RBP11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 SHCBP1LQ9BZQ2 653 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 NDEL1Q9GZM8 345 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 DNAJC18Q9H819 358 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 A0A0U1RQJ8 604 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 MMP3P08254 477 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 MYBL2P10244 700 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 CCL5P13501 91 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 SLC9A1P19634 815 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 NPTX2P47972 431 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 PPIDQ08752 370 aaKnown RBP11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 NCOA4Q13772 614 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 CYP4A22Q5TCH4 519 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 CDKAL1Q5VV42 579 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 TRIM72Q6ZMU5 477 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 NDUFAF2Q8N183 169 aa11.81□□□□□ -0.52
NPC1L1-201ENST00000289547 TATDN2Q93075 761 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms