RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 MIIPQ5JXC2 388 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 VITQ6UXI7 678 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 C4orf50Q6ZRC1 276 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 PDZD4Q76G19 769 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-201ENST00000288344 ITIH5Q86UX2 942 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 SPATA2LQ8IUW3 424 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-201ENST00000288344 ENOX1Q8TC92 643 aaKnown RBP9.74□□□□□ -0.85
HMGN1-201ENST00000288344 EPS8L1Q8TE68 723 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 SMARCD2Q92925 531 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 KAT5Q92993 513 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 KREMEN1Q96MU8 473 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 SLC22A12Q96S37 553 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 SEPT5Q99719 369 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-201ENST00000288344 SNX25Q9H3E2 840 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 TASP1Q9H6P5 420 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.74□□□□□ -0.854e-17■■■■■ 149.1
HMGN1-201ENST00000288344 CISHQ9NSE2 258 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 NUP210Q8TEM1 1887 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-201ENST00000288344 ZNF840PA6NDX5 716 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 FAM86C2PA6NEL3 165 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 TMEM221A6NGB7 291 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 F8VP50 259 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 M0R296 226 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 FGF19O95750 216 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 OLFM2O95897 454 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 MYL4P12829 197 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 VIPR2P41587 438 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 ZNF132P52740 706 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 KCNMA1Q12791 1236 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 ORC1Q13415 861 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 CUL2Q13617 745 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 TMEM31Q5JXX7 168 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 CDKAL1Q5VV42 579 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 ARHGAP17Q68EM7 881 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 SCARA5Q6ZMJ2 495 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 APTXQ7Z2E3 356 aaKnown RBP9.73□□□□□ -0.85
HMGN1-201ENST00000288344 FAM35AQ86V20 835 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 MON1AQ86VX9 555 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 ARID3BQ8IVW6 561 aaPredicted RBP9.73□□□□□ -0.85
HMGN1-201ENST00000288344 MFSD6LQ8IWD5 586 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 ZSCAN18Q8TBC5 510 aaPredicted RBP9.73□□□□□ -0.85
HMGN1-201ENST00000288344 CHFRQ96EP1 664 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 CYFIP2Q96F07 1278 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 UBXN6Q9BZV1 441 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 THAP9Q9H5L6 903 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 SIX2Q9NPC8 291 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 SAMSN1Q9NSI8 373 aaKnown RBP9.73□□□□□ -0.85
HMGN1-201ENST00000288344 OBP2AQ9NY56 170 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 R3HCC1Q9Y3T6 440 aaKnown RBP9.73□□□□□ -0.85
HMGN1-201ENST00000288344 USP3Q9Y6I4 520 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 PATJQ8NI35 1801 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 COL4A3Q01955 1670 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 FRYLO94915 3013 aa9.73□□□□□ -0.85
HMGN1-201ENST00000288344 GTPBP10A4D1E9 387 aaKnown RBP9.72□□□□□ -0.85
HMGN1-201ENST00000288344 PRAMEF12O95522 483 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 AFPP02771 609 aaKnown RBP9.72□□□□□ -0.85
HMGN1-201ENST00000288344 P4HA1P13674 534 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 CCDC130P13994 396 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 TCF3P15923 654 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 MLLT6P55198 1093 aaPredicted RBP9.72□□□□□ -0.85
HMGN1-201ENST00000288344 STARD6P59095 220 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 CYP27A1Q02318 531 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 GCNT1Q02742 428 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 DCAF17Q5H9S7 520 aaPredicted RBP9.72□□□□□ -0.85
HMGN1-201ENST00000288344 RAB41Q5JT25 222 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 PPP1R26Q5T8A7 1209 aaPredicted RBP9.72□□□□□ -0.85
HMGN1-201ENST00000288344 CLEC20AQ6ZU45 233 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 MTSS1LQ765P7 747 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 BHLHA9Q7RTU4 235 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 ARHGEF19Q8IW93 802 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 CMTM8Q8IZV2 173 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 ELMOD1Q8N336 334 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 SCAMP5Q8TAC9 235 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 PRR7Q8TB68 274 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 SLC2A14Q8TDB8 520 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 TFAP2BQ92481 460 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 TMEM176AQ96HP8 235 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 TNIP3Q96KP6 325 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 CNOT6LQ96LI5 555 aaKnown RBP9.72□□□□□ -0.85
HMGN1-201ENST00000288344 FAM83CQ9BQN1 747 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 NT5C1AQ9BXI3 368 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 RNF38Q9H0F5 515 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 ATXN3LQ9H3M9 355 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 MMRN2Q9H8L6 949 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 ZFP14Q9HCL3 533 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 COMMD8Q9NX08 183 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 DLGAP2Q9P1A6 1054 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 CACNA1IQ9P0X4 2223 aa9.72□□□□□ -0.85
HMGN1-201ENST00000288344 KMT2EQ8IZD2 1858 aa9.71□□□□□ -0.85
HMGN1-201ENST00000288344 HEPACAM2A8MVW5 462 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 MBD3O95983 291 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 ZNF18P17022 549 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 PFKLP17858 780 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 SLC9A1P19634 815 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 PON1P27169 355 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 CDC25CP30307 473 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 GRIK1P39086 918 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 RPL34P49207 117 aaKnown RBP9.71□□□□□ -0.86
HMGN1-201ENST00000288344 CYP4F8P98187 520 aa9.71□□□□□ -0.86
HMGN1-201ENST00000288344 ZNF268Q14587 947 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms