RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 SLC12A4Q9UP95 1085 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 ZNF541Q9H0D2 1346 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 HUS1O60921 280 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 TOMM70O94826 608 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 TRUB2O95900 331 aaKnown RBP10.47□□□□□ -0.73
HMGCR-201ENST00000287936 GSTA2P09210 222 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 TAC1P20366 129 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 TARSP26639 723 aaKnown RBP10.47□□□□□ -0.73
HMGCR-201ENST00000287936 ELK3P41970 407 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 ZNF143P52747 638 aaPredicted RBP10.47□□□□□ -0.73
HMGCR-201ENST00000287936 INPP5DQ92835 1189 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 SLC10A4Q96EP9 437 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 TNIP3Q96KP6 325 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.47□□□□□ -0.731e-7■■■■■ 31.8
HMGCR-201ENST00000287936 GPRC5DQ9NZD1 345 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 CNTNAP2Q9UHC6 1331 aa10.47□□□□□ -0.73
HMGCR-201ENST00000287936 SYNJ2BP-COX16A0A087WUM0 186 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 A0A087WZ62 844 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 CHADO15335 359 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 DIAPH2O60879 1101 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 UNC5CO95185 931 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 ADORA2BP29275 332 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 RPA3P35244 121 aaPredicted RBP10.46□□□□□ -0.73
HMGCR-201ENST00000287936 SESN3P58005 492 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 GPC2Q8N158 579 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 APOPT1Q96IL0 206 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 FDXACB1Q9BRP7 624 aaPredicted RBP10.46□□□□□ -0.73
HMGCR-201ENST00000287936 ASCC2Q9H1I8 757 aaPredicted RBP10.46□□□□□ -0.73
HMGCR-201ENST00000287936 VPS11Q9H270 941 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 COX16Q9P0S2 106 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 FETUBQ9UGM5 382 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 TSPAN16Q9UKR8 245 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 ANGPTL2Q9UKU9 493 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 ANKRD31Q8N7Z5 1873 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 STAMBPO95630 424 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 CD4P01730 458 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 INSRRP14616 1297 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 NDST1P52848 882 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 RAD23BP54727 409 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 BNIP1Q12981 228 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 PRPSAP1Q14558 356 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 SH3D19Q5HYK7 790 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 ZDHHC17Q8IUH5 632 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 TCP10LQ8TDR4 215 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 FAM172AQ8WUF8 416 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 TRAPPC12Q8WVT3 735 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 ANKRD27Q96NW4 1050 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 FAM111AQ96PZ2 611 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 GPR20Q99678 358 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 MYLK2Q9H1R3 596 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 SMYD3Q9H7B4 428 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 ZNF408Q9H9D4 720 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 CNTN6Q9UQ52 1028 aa10.46□□□□□ -0.73
HMGCR-201ENST00000287936 KIF13BQ9NQT8 1826 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 NFICP08651 508 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 SLC18A1P54219 525 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.46□□□□□ -0.741e-11■■■□□ 16.8
HMGCR-201ENST00000287936 JOSD2Q8TAC2 188 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 NSL1Q96IY1 281 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 SLC13A1Q9BZW2 595 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 FAM124BQ9H5Z6 455 aaPredicted RBP10.46□□□□□ -0.74
HMGCR-201ENST00000287936 AAASQ9NRG9 546 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 FAM49BQ9NUQ9 324 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 HAO1Q9UJM8 370 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 MGRN1O60291 552 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 RGS20O76081 388 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 CFHP08603 1231 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 SKIP12755 728 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 IRX4P78413 519 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 SLC45A4Q5BKX6 768 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 EFHC2Q5JST6 749 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 EEF1DP3Q658K8 133 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 VCX3BQ9H321 246 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 CXorf56Q9H5V9 222 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 SAR1AQ9NR31 198 aa10.46□□□□□ -0.74
HMGCR-201ENST00000287936 ADARB2Q9NS39 739 aaKnown RBP10.46□□□□□ -0.74
HMGCR-201ENST00000287936 ARHGAP42A6NI28 874 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 PPP1R12AO14974 1030 aaPredicted RBP10.45□□□□□ -0.74
HMGCR-201ENST00000287936 MSCO60682 206 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 EDF1O60869 148 aaKnown RBP10.45□□□□□ -0.74
HMGCR-201ENST00000287936 LRCH4O75427 683 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 PTPN4P29074 926 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 FDFT1P37268 417 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 ZNF132P52740 706 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 SP2Q02086 613 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 LRRC39Q96DD0 335 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 RRN3P2A6NIE6 340 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 KBTBD13C9JR72 458 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 ANP32DO95626 131 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 LCP1P13796 627 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 CREB1P16220 341 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 SNAPC2Q13487 334 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 MTM1Q13496 603 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 ARL13BQ3SXY8 428 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 EFHC1Q5JVL4 640 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 MAP3K21Q5TCX8 1036 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 XYLT1Q86Y38 959 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 TRPM4Q8TD43 1214 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 TFAP2BQ92481 460 aa10.45□□□□□ -0.74
HMGCR-201ENST00000287936 E2F7Q96AV8 911 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms