RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 C4orf33Q8N1A6 199 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.84□□□□□ -0.67
SKA1-201ENST00000285116 DTX3LQ8TDB6 740 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 NSUN6Q8TEA1 469 aaKnown RBP10.84□□□□□ -0.67
SKA1-201ENST00000285116 CENPKQ9BS16 269 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 VPS37BQ9H9H4 285 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 PNPLA8Q9NP80 782 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 ARL8BQ9NVJ2 186 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 PHF24Q9UPV7 400 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 COMMD3-BMI1R4GMX3 469 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 CFAP69A5D8W1 941 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 POC1B-GALNT4F8VUJ3 575 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 FAM189A1O60320 539 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 ATP5BP06576 529 aaKnown RBP10.84□□□□□ -0.67
SKA1-201ENST00000285116 KRT7P08729 469 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 FGFR1P11362 822 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 NEK3P51956 506 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 ACTR2P61160 394 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 TGFB2P61812 414 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 OGDHQ02218 1023 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 SLC18A2Q05940 514 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 SURF1Q15526 300 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 PABPC1LQ4VXU2 614 aaKnown RBP10.84□□□□□ -0.67
SKA1-201ENST00000285116 PLEKHG4Q58EX7 1191 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 CCDC60Q8IWA6 550 aaPredicted RBP10.84□□□□□ -0.67
SKA1-201ENST00000285116 SCYL3Q8IZE3 742 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 CPT1BQ92523 772 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 HAPLN3Q96S86 360 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 KANSL3Q9P2N6 904 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 SEPT9Q9UHD8 586 aaPredicted RBP10.84□□□□□ -0.67
SKA1-201ENST00000285116 TMCO1Q9UM00 188 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 A0A0G2JMZ2 1700 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 LRRC37A2A6NM11 1700 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 IGKV6D-21A0A0A0MT36 114 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 UBTFL6P0CB48 400 aaPredicted RBP10.83□□□□□ -0.68
SKA1-201ENST00000285116 ZSCAN5DPP0CG00 497 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 TCF4P15884 667 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 SOX10P56693 466 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 ARMC3Q5W041 872 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 SWSAP1Q6NVH7 229 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 SH2D5Q6ZV89 423 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 PASD1Q8IV76 773 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 KBTBD2Q8IY47 623 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 STKLD1Q8NE28 680 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 TRPM4Q8TD43 1214 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 WDR60Q8WVS4 1066 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 SKA1Q96BD8 255 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 OLFM3Q96PB7 478 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 FAM118BQ9BPY3 351 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 TRIM55Q9BYV6 548 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 FRMD8Q9BZ67 464 aaPredicted RBP10.83□□□□□ -0.68
SKA1-201ENST00000285116 MKS1Q9NXB0 559 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 HEY2Q9UBP5 337 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 NUMBLQ9Y6R0 609 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 A0A1W2PPM1 405 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 F8W8V4 182 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 PYGBP11216 843 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 KRT4P19013 534 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 ETV4P43268 484 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 MAPK6Q16659 721 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 ATP13A4Q4VNC1 1196 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 LIN52Q52LA3 116 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 C2CD6Q53TS8 623 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 CCDC62Q6P9F0 684 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 CPXCR1Q8N123 301 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 PDCD7Q8N8D1 485 aaKnown RBP10.83□□□□□ -0.68
SKA1-201ENST00000285116 ELMO3Q96BJ8 720 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 C12orf42Q96LP6 360 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 PAFAH2Q99487 392 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 WDR83Q9BRX9 315 aaKnown RBP10.83□□□□□ -0.68
SKA1-201ENST00000285116 MSTO1Q9BUK6 570 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 IMPG2Q9BZV3 1241 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 RNF146Q9NTX7 359 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 DCTN4Q9UJW0 460 aa10.83□□□□□ -0.68
SKA1-201ENST00000285116 MTO1Q9Y2Z2 717 aaKnown RBP10.83□□□□□ -0.68
SKA1-201ENST00000285116 F8VP50 259 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 PI4K2BG5E9Z4 385 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 ESRRAP11474 423 aaPredicted RBP10.82□□□□□ -0.68
SKA1-201ENST00000285116 ETS1P14921 441 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 ATF7P17544 494 aaPredicted RBP10.82□□□□□ -0.68
SKA1-201ENST00000285116 CDK7P50613 346 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 RAP1GDS1P52306 607 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 THOC5Q13769 683 aaKnown RBP10.82□□□□□ -0.68
SKA1-201ENST00000285116 BAATQ14032 418 aaPredicted RBP10.82□□□□□ -0.68
SKA1-201ENST00000285116 PHLDB2Q86SQ0 1253 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 LCA5Q86VQ0 697 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 WDTC1Q8N5D0 677 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 RFWD2Q8NHY2 731 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 PYROXD1Q8WU10 500 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 TEPSINQ96N21 525 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 MCEEQ96PE7 176 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 NIF3L1Q9GZT8 377 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 MIS12Q9H081 205 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 TAS2R1Q9NYW7 299 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 CNTN3Q9P232 1028 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 ZSWIM8A7E2V4 1837 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 SGK1O00141 431 aa10.82□□□□□ -0.68
SKA1-201ENST00000285116 OATP04181 439 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms