RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TCF25Q9BQ70 676 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 LRRC4Q9HBW1 653 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 CTAGE9A4FU28 777 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 F8VP50 259 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 PAPSS1O43252 624 aaPredicted RBP19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 CXCL14O95715 111 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 LCP1P13796 627 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 ERVFC1P60507 584 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 RAB33AQ14088 237 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 RAB41Q5JT25 222 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 TPGS2Q68CL5 300 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 DNAJC24Q6P3W2 148 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 FAM183BPQ6ZVS7 135 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 TPCN2Q8NHX9 752 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 ALS2CR12Q96Q35 445 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 AFF4Q9UHB7 1163 aaKnown RBP19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 IRAK3Q9Y616 596 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 PLXNA4Q9HCM2 1894 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 SIGLEC16A6NMB1 481 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 TRIM66O15016 1216 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 TEX28O15482 410 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 DNAJB1P25685 340 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 NDUFV1P49821 464 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 ADCY1Q08828 1119 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 DUSP4Q13115 394 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 PPP1R15BQ5SWA1 713 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 OR6B2Q6IFH4 312 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 C8orf48Q96LL4 319 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 L2HGDHQ9H9P8 463 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 ENTPD7Q9NQZ7 604 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 TLR9Q9NR96 1032 aa19.9■□□□□ 0.78
PDLIM3-202ENST00000284770 GBF1Q92538 1859 aa19.89■□□□□ 0.78
PDLIM3-202ENST00000284770 RANBP2P49792 3224 aaKnown RBP19.89■□□□□ 0.78
PDLIM3-202ENST00000284770 PTPRDP23468 1912 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 GRID2IPA4D2P6 1211 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 GOLGA8SH3BPF8 625 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 KRT3P12035 628 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 ATF2P15336 505 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 TKTL1P51854 596 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 ADIGQ0VDE8 80 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 OLFML1Q6UWY5 402 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 GPRIN1Q7Z2K8 1008 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 SCN4BQ8IWT1 228 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 TTC9BQ8N6N2 239 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 FEZF2Q8TBJ5 459 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 SELENOOQ9BVL4 669 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 NKX2-4Q9H2Z4 354 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 CRISPLD1Q9H336 500 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 HSFX1Q9UBD0 423 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 SLC27A5Q9Y2P5 690 aa19.89■□□□□ 0.77
PDLIM3-202ENST00000284770 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 PALMO75781 387 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 CNPP09543 421 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 HAPLN1P10915 354 aaPredicted RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 CA8P35219 290 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 SLC6A3Q01959 620 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 SMC1AQ14683 1233 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 FAM102AQ5T9C2 384 aaPredicted RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 SIX6OS1Q8N1H7 587 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 MRPL43Q8N983 215 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 LRRC57Q8N9N7 239 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 NGRNQ9NPE2 291 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 JRKLQ9Y4A0 524 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 TMEM191CA6NGB0 347 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 H3BNC9 293 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 ENC1O14682 589 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 GRM6O15303 877 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 URI1O94763 535 aaPredicted RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 FBXO21O94952 628 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 GJB6O95452 261 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 ATP1A1P05023 1023 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 SCNN1AP37088 669 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 RPL7AP62424 266 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 AMPD2Q01433 879 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 CAMK1Q14012 370 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 DDR2Q16832 855 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 MGAT5BQ3V5L5 792 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 DCUN1D2Q6PH85 259 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 PIWIL1Q96J94 861 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 MCEEQ96PE7 176 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 SEPT5Q99719 369 aaPredicted RBP19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 CNGB3Q9NQW8 809 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 ANAPC7Q9UJX3 599 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 MAFFQ9ULX9 164 aa19.88■□□□□ 0.77
PDLIM3-202ENST00000284770 TNFRSF10BO14763 440 aa19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 FSCN2O14926 492 aa19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 BUB1BO60566 1050 aaPredicted RBP19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 TUFMP49411 452 aaKnown RBP19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 GPM6BQ13491 265 aa19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 PAPD7Q5XG87 772 aaKnown RBP19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 PPP2R2DQ66LE6 453 aa19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 CLEC4CQ8WTT0 213 aa19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 KLHL5Q96PQ7 755 aa19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 EMILIN2Q9BXX0 1053 aa19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 TRIM7Q9C029 511 aa19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 METTL5Q9NRN9 209 aaKnown RBP19.87■□□□□ 0.77
PDLIM3-202ENST00000284770 C2orf71A6NGG8 1288 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 MYO1FO00160 1098 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 RIOK3O14730 519 aaKnown RBP19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 RFC1P35251 1148 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms