RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 APEX1P27695 318 aaKnown RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 GPD2P43304 727 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 PRKAA2P54646 552 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CDH8P55286 799 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 TBL3Q12788 808 aaKnown RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 MRNIPQ6NTE8 343 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ARHGEF25Q86VW2 580 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 TMTC1Q8IUR5 882 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CCDC28AQ8IWP9 274 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 AGGF1Q8N302 714 aaeCLIP2.94□□□□□ -1.94
CHD1-201ENST00000284049 IL31RAQ8NI17 732 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ST7LQ8TDW4 575 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ANKS1AQ92625 1134 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 RBM15Q96T37 977 aaKnown RBP eCLIP2.94□□□□□ -1.94
CHD1-201ENST00000284049 DPCDQ9BVM2 203 aaPredicted RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 FAM83DQ9H4H8 585 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 DTNAQ9Y4J8 743 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ACTL7BQ9Y614 415 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 DHX57Q6P158 1386 aaKnown RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 KIF1BO60333 1816 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 COL22A1Q8NFW1 1626 aaPredicted RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 SHISA8B8ZZ34 492 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 PSMD9O00233 223 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 PIK3R2O00459 728 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 DNPH1O43598 174 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ADCY8P40145 1251 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 SLC11A2P49281 568 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 NKX3-2P78367 333 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CBX3Q13185 183 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 TMED1Q13445 227 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 SNX17Q15036 470 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ARMC4Q5T2S8 1044 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 FAM83HQ6ZRV2 1179 aaPredicted RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 UBE3DQ7Z6J8 389 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ARHGAP39Q9C0H5 1083 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 NDUFAF4Q9P032 175 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 WDR35Q9P2L0 1181 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 FBXL5Q9UKA1 691 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CLCA2Q9UQC9 943 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 SOS2Q07890 1332 aaPredicted RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 RPTORQ8N122 1335 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 KIF28PB7ZC32 967 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 MASP2O00187 686 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ERAL1O75616 437 aaKnown RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 DLGAP3O95886 979 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 HMOX1P09601 288 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CKMT1AP12532 417 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 BMP3P12645 472 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 PRDX5P30044 214 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 BAG6P46379 1132 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 MFAP4P55083 255 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 TEFQ10587 303 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CAMK1Q14012 370 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 OASLQ15646 514 aaKnown RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 SLC35G1Q2M3R5 365 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ZNF805Q5CZA5 627 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CYB5RLQ6IPT4 315 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 IYDQ6PHW0 289 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 SAMD14Q8IZD0 417 aaPredicted RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 LRRC43Q8N309 656 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 KIF18AQ8NI77 898 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 METTL6Q8TCB7 284 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 OTUD7AQ8TE49 926 aaPredicted RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 ASB15Q8WXK1 588 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 PPP2R3CQ969Q6 453 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 NELL2Q99435 816 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 PIMREGQ9BSJ6 248 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 TTPALQ9BTX7 342 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 HDAC8Q9BY41 377 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 FBXO28Q9NVF7 368 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ARHGEF38Q9NXL2 777 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ARHGAP20Q9P2F6 1191 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 KCND3Q9UK17 655 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 PALD1Q9ULE6 856 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CNPY2Q9Y2B0 182 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 DNAJC16Q9Y2G8 782 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 SYNJ2BP-COX16A0A087WUM0 186 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 TRAV34A0A0B4J273 112 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ZNF785A8K8V0 405 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 RTCAO00442 366 aaKnown RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 SRGAP2O75044 1071 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ATP6V1G1O75348 118 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 PIAS2O75928 621 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ZNF865P0CJ78 1059 aaPredicted RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 CCDC192P0DO97 292 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 RARBP10826 455 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ABCD3P28288 659 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 MCAMP43121 646 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 GLRBP48167 497 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CENPAP49450 140 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CDH15P55291 814 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 RAP2BP61225 183 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 PTH1RQ03431 593 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 TARBP2Q15633 366 aaKnown RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 CATSPEREQ5SY80 951 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 C6orf163Q5TEZ5 329 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 KIAA1841Q6NSI8 718 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 GPAT2Q6NUI2 795 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 KLHL35Q6PF15 583 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CRTC1Q6UUV9 634 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms