RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 OSBPL9Q96SU4 736 aa11.97□□□□□ -0.49
XRCC4-201ENST00000282268 SEPT5Q99719 369 aaPredicted RBP11.97□□□□□ -0.49
XRCC4-201ENST00000282268 HERC2P3Q9BVR0 1158 aa11.97□□□□□ -0.49
XRCC4-201ENST00000282268 ULBP1Q9BZM6 244 aa11.97□□□□□ -0.49
XRCC4-201ENST00000282268 ABCB6Q9NP58 842 aa11.97□□□□□ -0.49
XRCC4-201ENST00000282268 DMAP1Q9NPF5 467 aaPredicted RBP11.97□□□□□ -0.49
XRCC4-201ENST00000282268 SMARCAL1Q9NZC9 954 aa11.97□□□□□ -0.49
XRCC4-201ENST00000282268 EHD2Q9NZN4 543 aa11.97□□□□□ -0.49
XRCC4-201ENST00000282268 IP6K2Q9UHH9 426 aa11.97□□□□□ -0.49
XRCC4-201ENST00000282268 PTPRSQ13332 1948 aa11.96□□□□□ -0.49
XRCC4-201ENST00000282268 FGF18O76093 207 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 PROSCO94903 275 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 URODP06132 367 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 MARCKSL1P49006 195 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 TAP1Q03518 808 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 NFE2Q16621 373 aaPredicted RBP11.96□□□□□ -0.5
XRCC4-201ENST00000282268 CDO1Q16878 200 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 MGAT5BQ3V5L5 792 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 ZFYVE27Q5T4F4 411 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 PAPD7Q5XG87 772 aaKnown RBP11.96□□□□□ -0.5
XRCC4-201ENST00000282268 FAM109BQ6ICB4 259 aaPredicted RBP11.96□□□□□ -0.5
XRCC4-201ENST00000282268 SPRED2Q7Z698 418 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 DDX53Q86TM3 631 aaKnown RBP11.96□□□□□ -0.5
XRCC4-201ENST00000282268 KLHL23Q8NBE8 558 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 PHOSPHO2Q8TCD6 241 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 COG1Q8WTW3 980 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 RXFP2Q8WXD0 754 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 KRT35Q92764 455 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 MS4A14Q96JA4 679 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 CALR3Q96L12 384 aaKnown RBP11.96□□□□□ -0.5
XRCC4-201ENST00000282268 CARD6Q9BX69 1037 aa11.96□□□□□ -0.5
XRCC4-201ENST00000282268 MTMR11A4FU01 709 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 HHLA1C9JL84 531 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 TBC1D4O60343 1298 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 PDGFRAP16234 1089 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 GPD1P21695 349 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 PPM1AP35813 382 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 FLT3P36888 993 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 ATP11AP98196 1134 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 AMPD2Q01433 879 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 ADCY1Q08828 1119 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 ZNF252P-AS1Q0IIN9 211 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 DUSP4Q13115 394 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 ZNF211Q13398 564 aaPredicted RBP11.95□□□□□ -0.5
XRCC4-201ENST00000282268 LLGL1Q15334 1064 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 C15orf59Q2T9L4 293 aaPredicted RBP11.95□□□□□ -0.5
XRCC4-201ENST00000282268 SH3PXD2AQ5TCZ1 1133 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 TRNP1Q6NT89 227 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 CC2D1AQ6P1N0 951 aaPredicted RBP11.95□□□□□ -0.5
XRCC4-201ENST00000282268 SCAMP5Q8TAC9 235 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 KCTD13Q8WZ19 329 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 CFAP57Q96MR6 1250 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 C17orf80Q9BSJ5 609 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 ALG13Q9NP73 1137 aaKnown RBP11.95□□□□□ -0.5
XRCC4-201ENST00000282268 CHST7Q9NS84 486 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 MTRRQ9UBK8 725 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 CDC23Q9UJX2 597 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 MRFAP1Q9Y605 127 aa11.95□□□□□ -0.5
XRCC4-201ENST00000282268 VWA8A3KMH1 1905 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 SYNJ2BP-COX16A0A087WUM0 186 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 DDX3YO15523 660 aaKnown RBP11.94□□□□□ -0.5
XRCC4-201ENST00000282268 CEP104O60308 925 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 EFEMP2O95967 443 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 TCF4P15884 667 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 GSCP56915 257 aaPredicted RBP11.94□□□□□ -0.5
XRCC4-201ENST00000282268 TAS2R40P59535 323 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 MRPS5P82675 430 aaKnown RBP11.94□□□□□ -0.5
XRCC4-201ENST00000282268 ROR1Q01973 937 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 DSG1Q02413 1049 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 GPR17Q13304 367 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 RAB6CQ53S08 254 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 HFE2Q6ZVN8 426 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 RNF168Q8IYW5 571 aaPredicted RBP11.94□□□□□ -0.5
XRCC4-201ENST00000282268 UBL4BQ8N7F7 174 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 LRRN4CLQ8ND94 238 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.94□□□□□ -0.5
XRCC4-201ENST00000282268 GIPC2Q8TF65 315 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 PIK3R5Q8WYR1 880 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 ACSF2Q96CM8 615 aaPredicted RBP11.94□□□□□ -0.5
XRCC4-201ENST00000282268 HES6Q96HZ4 224 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 CLSTN3Q9BQT9 956 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 RAB6CQ9H0N0 254 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 CRISPLD1Q9H336 500 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 ZWILCHQ9H900 591 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 CSNK1G1Q9HCP0 422 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 KLHL11Q9NVR0 708 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 COX16Q9P0S2 106 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 PCSK1NQ9UHG2 260 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 TMEM59LQ9UK28 342 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 WDR27A2RRH5 827 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 ARHGEF15O94989 841 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 VNN2O95498 520 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 ZBED1O96006 694 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 LINC00271P0C7V0 271 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 TCP1P17987 556 aaKnown RBP11.94□□□□□ -0.5
XRCC4-201ENST00000282268 SLC1A1P43005 524 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 RPL34P49207 117 aaKnown RBP11.94□□□□□ -0.5
XRCC4-201ENST00000282268 SLC5A3P53794 718 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 PIGHQ14442 188 aaPredicted RBP11.94□□□□□ -0.5
XRCC4-201ENST00000282268 CCDC181Q5TID7 509 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms