RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 PPP3CCP48454 512 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 LHX1P48742 406 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 NEK4P51957 841 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 ATP2C1P98194 919 aaPredicted RBP12.83□□□□□ -0.36
SPC25-201ENST00000282074 RESTQ13127 1097 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 ARSHQ5FYA8 562 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 L1TD1Q5T7N2 865 aaKnown RBP12.83□□□□□ -0.36
SPC25-201ENST00000282074 EMC10Q5UCC4 262 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 HSCBQ8IWL3 235 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 DEFB119Q8N690 84 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 CEP295NLQ96MC4 621 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 PNMA5Q96PV4 448 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 LLPHQ9BRT6 129 aaKnown RBP12.83□□□□□ -0.36
SPC25-201ENST00000282074 FAM124BQ9H5Z6 455 aaPredicted RBP12.83□□□□□ -0.36
SPC25-201ENST00000282074 PARVGQ9HBI0 331 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 AGO2Q9UKV8 859 aaKnown RBP12.83□□□□□ -0.36
SPC25-201ENST00000282074 FREM2Q5SZK8 3169 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 URB1O60287 2271 aaKnown RBP12.83□□□□□ -0.36
SPC25-201ENST00000282074 TCHHQ07283 1943 aa12.83□□□□□ -0.36
SPC25-201ENST00000282074 TBC1D3BA6NDS4 549 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
SPC25-201ENST00000282074 ZNF217O75362 1048 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 ACAT1P24752 427 aaKnown RBP12.82□□□□□ -0.36
SPC25-201ENST00000282074 MAGEA11P43364 429 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 TOB1P50616 345 aaPredicted RBP12.82□□□□□ -0.36
SPC25-201ENST00000282074 SLC7A9P82251 487 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 SLC39A4Q6P5W5 647 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 C4orf50Q6ZRC1 276 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 PNPLA1Q8N8W4 532 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 GLIS3Q8NEA6 775 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 OR2I1PQ8NGU4 316 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 LRIG1Q96JA1 1093 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 SPATA17Q96L03 361 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 CAMK1GQ96NX5 476 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 REEP2Q9BRK0 252 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 TBC1D14Q9P2M4 693 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 SUSD2Q9UGT4 822 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 L1RE1Q9UN81 338 aa12.82□□□□□ -0.36
SPC25-201ENST00000282074 TNRC6BQ9UPQ9 1833 aaKnown RBP12.82□□□□□ -0.36
SPC25-201ENST00000282074 SMG1Q96Q15 3661 aaKnown RBP12.82□□□□□ -0.36
SPC25-201ENST00000282074 ANKRD63C9JTQ0 380 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 ADAM23O75077 832 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 ADH5P11766 374 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 GNSP15586 552 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 HMGN5P82970 282 aaKnown RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 ZXDBP98169 803 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 GTF2BQ00403 316 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 POSTNQ15063 836 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 MAPRE1Q15691 268 aaKnown RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 PLEKHG6Q3KR16 790 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 SYCP2LQ5T4T6 812 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 RHBDF2Q6PJF5 856 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 VSTM1Q6UX27 236 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 GPBP1Q86WP2 473 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 DDX42Q86XP3 938 aaKnown RBP eCLIP12.81□□□□□ -0.36
SPC25-201ENST00000282074 NAXDQ8IW45 347 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 SFTPA1Q8IWL2 248 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 RGL4Q8IZJ4 473 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 CACTINQ8WUQ7 758 aaKnown RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 PKMYT1Q99640 499 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 ZHX3Q9H4I2 956 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 MAGEC2Q9UBF1 373 aaPredicted RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 AGAP1Q9UPQ3 857 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 RAXQ9Y2V3 346 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 STYXL1Q9Y6J8 313 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 ADAMTS9Q9P2N4 1935 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 PLXND1Q9Y4D7 1925 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 MYO18AQ92614 2054 aaKnown RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 KRT18P05783 430 aaKnown RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 ANXA13P27216 316 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 POLR2BP30876 1174 aaKnown RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 DDIT3P35638 169 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 GRIK1P39086 918 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 ZNF131P52739 623 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 TFAMQ00059 246 aaKnown RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 GAD2Q05329 585 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 KDSRQ06136 332 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 BTBD8Q5XKL5 378 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 DENND5BQ6ZUT9 1274 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 TOGARAM2Q6ZUX3 1019 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 CCDC83Q8IWF9 413 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 LRRC52Q8N7C0 313 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 ZNF513Q8N8E2 541 aaPredicted RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 TRIML1Q8N9V2 468 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 SPRYD3Q8NCJ5 442 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 MDM1Q8TC05 714 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 POMGNT1Q8WZA1 660 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 FOXJ1Q92949 421 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 BBC3Q96PG8 261 aaPredicted RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 ZDHHC5Q9C0B5 715 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 GDAP2Q9NXN4 497 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 CALCOCO1Q9P1Z2 691 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 KIAA1522Q9P206 1035 aaPredicted RBP12.81□□□□□ -0.36
SPC25-201ENST00000282074 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 CPQQ9Y646 472 aa12.81□□□□□ -0.36
SPC25-201ENST00000282074 ANAPC1Q9H1A4 1944 aa12.8□□□□□ -0.36
SPC25-201ENST00000282074 IGHV1OR15-9A0A0B4J2B8 117 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms