RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ZNF302Q9NR11 478 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 RGL1Q9NZL6 768 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 PDP2Q9P2J9 529 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 ZNF212Q9UDV6 495 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 PCDHA10Q9Y5I2 948 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 TANC1Q9C0D5 1861 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 A8MXQ7 604 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 WDR64B1ANS9 1081 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 PITPNM1O00562 1244 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 TREHO43280 583 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 PSAPP07602 524 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 EPHB2P29323 1055 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 MXI1P50539 228 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 CYP4A11Q02928 519 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 TMED2Q15363 201 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 HABP4Q5JVS0 413 aaKnown RBP10.82□□□□□ -0.68
UPF3B-201ENST00000276201 FAM160B1Q5W0V3 765 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 ZNF365Q70YC5 407 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 NLRP9Q7RTR0 991 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 TMEM199Q8N511 208 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 XXYLT1Q8NBI6 393 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 ATP6V0A1Q93050 837 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 ALKBH8Q96BT7 664 aaKnown RBP10.82□□□□□ -0.68
UPF3B-201ENST00000276201 PTCD3Q96EY7 689 aaKnown RBP10.82□□□□□ -0.68
UPF3B-201ENST00000276201 SCLYQ96I15 445 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 BTBD10Q9BSF8 475 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 MLXIPLQ9NP71 852 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 NMRK1Q9NWW6 199 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 STX18Q9P2W9 335 aaKnown RBP10.82□□□□□ -0.68
UPF3B-201ENST00000276201 DNAJB4Q9UDY4 337 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 SCOCQ9UIL1 159 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 ZFP69BQ9UJL9 534 aa10.82□□□□□ -0.68
UPF3B-201ENST00000276201 NRCAMQ92823 1304 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 MAGEA13PA6NCF6 341 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 SFI1A8K8P3 1242 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 DNALI1O14645 258 aaPredicted RBP10.81□□□□□ -0.68
UPF3B-201ENST00000276201 ALOX15BO15296 676 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 ZC3H11AO75152 810 aaKnown RBP eCLIP10.81□□□□□ -0.68
UPF3B-201ENST00000276201 TROVE2P10155 538 aaKnown RBP eCLIP10.81□□□□□ -0.68
UPF3B-201ENST00000276201 RRM1P23921 792 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 SLC26A2P50443 739 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 JAK3P52333 1124 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 AP1B1Q10567 949 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 BFSP2Q13515 415 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 KPNB1Q14974 876 aaKnown RBP10.81□□□□□ -0.68
UPF3B-201ENST00000276201 MORF4L2Q15014 288 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 GRIK4Q16099 956 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 UGCGQ16739 394 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 EFHC2Q5JST6 749 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 TMEM154Q6P9G4 183 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 CLNKQ7Z7G1 428 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.81□□□□□ -0.68
UPF3B-201ENST00000276201 EXD1Q8NHP7 514 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 TMC2Q8TDI7 906 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 ZNF75CPQ92670 426 aaPredicted RBP10.81□□□□□ -0.68
UPF3B-201ENST00000276201 VWCEQ96DN2 955 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 TMEM117Q9H0C3 514 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 ANKFY1Q9P2R3 1169 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 DRG1Q9Y295 367 aaKnown RBP10.81□□□□□ -0.68
UPF3B-201ENST00000276201 SLC4A7Q9Y6M7 1214 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 WDR81Q562E7 1941 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 EXOC1LA0A1B0GW35 172 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 A0A1W2PPC1 479 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 TM9SF1O15321 606 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 FAM155BO75949 473 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 PROSCO94903 275 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 UNGP13051 313 aaPredicted RBP10.81□□□□□ -0.68
UPF3B-201ENST00000276201 INSRRP14616 1297 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 CDC25CP30307 473 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 SFNP31947 248 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 PTPN7P35236 360 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 SLC34A1Q06495 639 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 CDK18Q07002 472 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 CBLBQ13191 982 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 DNAJC3Q13217 504 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 PPIGQ13427 754 aaKnown RBP eCLIP10.81□□□□□ -0.68
UPF3B-201ENST00000276201 MUM1Q2TAK8 710 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 C9orf50Q5SZB4 431 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 MARCH8Q5T0T0 291 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 THEMIS2Q5TEJ8 643 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 FAM47EQ6ZV65 393 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 C16orf59Q7L2K0 433 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 OTOAQ7RTW8 1153 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 CPNE8Q86YQ8 564 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 TDHQ8IZJ6 230 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 SYCP3Q8IZU3 236 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 DAW1Q8N136 415 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 RDM1Q8NG50 284 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 HELQQ8TDG4 1101 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 NCSTNQ92542 709 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 GATA6Q92908 595 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 RBM15Q96T37 977 aaKnown RBP eCLIP10.81□□□□□ -0.684e-6■□□□□ 8.6
UPF3B-201ENST00000276201 DHRS4Q9BTZ2 278 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 CADM1Q9BY67 442 aaKnown RBP10.81□□□□□ -0.68
UPF3B-201ENST00000276201 VPS11Q9H270 941 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 IKZF4Q9H2S9 585 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 SYNCQ9H7C4 482 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 GABBR1Q9UBS5 961 aa10.81□□□□□ -0.68
UPF3B-201ENST00000276201 MAFBQ9Y5Q3 323 aaPredicted RBP10.81□□□□□ -0.68
UPF3B-201ENST00000276201 SCN5AQ14524 2016 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms