RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 NWD1Q149M9 1564 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 PIK3CDO00329 1044 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 CES2O00748 559 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 IRF2BP2Q7Z5L9 587 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 BBS5Q8N3I7 341 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 CALML6Q8TD86 181 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 USP13Q92995 863 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-201ENST00000269571 GANQ9H2C0 597 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 TASP1Q9H6P5 420 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 ZNF70Q9UC06 446 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-201ENST00000269571 SUN2Q9UH99 717 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 GRID1Q9ULK0 1009 aa12.55□□□□□ -0.4
ERBB2-201ENST00000269571 C3P01024 1663 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 PEX1O43933 1283 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 BANF1O75531 89 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 PPP4CP60510 307 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 CCNG2Q16589 344 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 LIN52Q52LA3 116 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 RINLQ6ZS11 566 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 LPCAT2Q7L5N7 544 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 CCNJLQ8IV13 435 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 INPP5DQ92835 1189 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 PRMT6Q96LA8 375 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 MRPL4Q9BYD3 311 aaKnown RBP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 KLHL4Q9C0H6 718 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 ACAD9Q9H845 621 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 TAGLN3Q9UI15 199 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 ARP10275 920 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 ADORA2BP29275 332 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 PMLP29590 882 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 KPNA2P52292 529 aaKnown RBP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 PIGHQ14442 188 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 NOP9Q86U38 636 aaKnown RBP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 ZBTB46Q86UZ6 589 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 DDIASQ8IXT1 998 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 UBA3Q8TBC4 463 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 MMTAG2Q9BU76 263 aaKnown RBP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 ATAD3AQ9NVI7 634 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 PIH1D1Q9NWS0 290 aaKnown RBP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 FAM237BA0A1B0GVD1 139 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 CIITAP33076 1130 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 PHKA2P46019 1235 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 SOX10P56693 466 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 TRMT5Q32P41 509 aaKnown RBP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 PLEKHA7Q6IQ23 1121 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 FAM13CQ8NE31 585 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 OR6P1Q8NGX9 317 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 OXNAD1Q96HP4 312 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 FAM167AQ96KS9 214 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 NYAP2Q9P242 653 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 SNX13Q9Y5W8 968 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 TMEM150BA6NC51 233 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 SERPINI2O75830 405 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 ARL13BQ3SXY8 428 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 THOC7Q6I9Y2 204 aaKnown RBP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 TMPRSS6Q8IU80 811 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 CDKL3Q8IVW4 592 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 GIPC3Q8TF64 312 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 GDPD5Q8WTR4 605 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.54□□□□□ -0.4
ERBB2-201ENST00000269571 ARHGEF38Q9NXL2 777 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 FBXO40Q9UH90 709 aa12.54□□□□□ -0.4
ERBB2-201ENST00000269571 WFS1O76024 890 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 PROSCO94903 275 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 MT-CO1P00395 513 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 NUDT17P0C025 328 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 TFE3P19532 575 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-201ENST00000269571 IL10P22301 178 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 KCNA4P22459 653 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 HMOX2P30519 316 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 ELK3P41970 407 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 SLC5A9Q2M3M2 681 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 ATP13A4Q4VNC1 1196 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 MFSD7Q6UXD7 560 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 SV2AQ7L0J3 742 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 EIF1ADQ8N9N8 165 aaKnown RBP12.53□□□□□ -0.4
ERBB2-201ENST00000269571 DNAJC19Q96DA6 116 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 OMA1Q96E52 524 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 FAM84AQ96KN4 292 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 POLR3CQ9BUI4 534 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-201ENST00000269571 FHDC1Q9C0D6 1143 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-201ENST00000269571 GPATCH2LQ9NWQ4 482 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.53□□□□□ -0.4
ERBB2-201ENST00000269571 SPATA7Q9P0W8 599 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 CARD8Q9Y2G2 431 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 PCDHA3Q9Y5H8 950 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 TAC1P20366 129 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 MAPK10P53779 464 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 NSUN2Q08J23 767 aaKnown RBP eCLIP12.53□□□□□ -0.4
ERBB2-201ENST00000269571 POTEAQ6S8J7 498 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 SCN4BQ8IWT1 228 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 AGBL1Q96MI9 1066 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 PRPF18Q99633 342 aaKnown RBP12.53□□□□□ -0.4
ERBB2-201ENST00000269571 CIDEBQ9UHD4 219 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 PRELID1Q9Y255 219 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 A8MXQ7 604 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 HUS1O60921 280 aa12.53□□□□□ -0.4
ERBB2-201ENST00000269571 NR3C2P08235 984 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms