RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 CTAGE3PQ8IX95 158 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 PDCD7Q8N8D1 485 aaKnown RBP17.81■□□□□ 0.44
SPG7-201ENST00000268704 NIPA2Q8N8Q9 360 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 KCTD6Q8NC69 237 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 SPATA18Q8TC71 538 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 MAP3K20Q9NYL2 800 aaKnown RBP17.81■□□□□ 0.44
SPG7-201ENST00000268704 FZD1Q9UP38 647 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 PIK3R2O00459 728 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 LSM8O95777 96 aaKnown RBP17.81■□□□□ 0.44
SPG7-201ENST00000268704 EGFRP00533 1210 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 LMNAP02545 664 aaKnown RBP17.81■□□□□ 0.44
SPG7-201ENST00000268704 ENO1P06733 434 aaKnown RBP17.81■□□□□ 0.44
SPG7-201ENST00000268704 SERPINB4P48594 390 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 TFAMQ00059 246 aaKnown RBP17.81■□□□□ 0.44
SPG7-201ENST00000268704 DPYSL3Q14195 570 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 HSF5Q4G112 596 aaPredicted RBP17.81■□□□□ 0.44
SPG7-201ENST00000268704 SH3PXD2AQ5TCZ1 1133 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 SLFN12LQ6IEE8 588 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 CCDC62Q6P9F0 684 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 SH2D5Q6ZV89 423 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 CDR2LQ86X02 465 aaPredicted RBP17.81■□□□□ 0.44
SPG7-201ENST00000268704 CAMKK2Q96RR4 588 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 CPXM1Q96SM3 734 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 IRAK4Q9NWZ3 460 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 FETUBQ9UGM5 382 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 H0YCG3 227 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 CYB561D2O14569 222 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 SUPT20HL2P0C7V6 817 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 YY1P25490 414 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 PSMC1P62191 440 aaKnown RBP17.8■□□□□ 0.44
SPG7-201ENST00000268704 ZNF200P98182 395 aaPredicted RBP17.8■□□□□ 0.44
SPG7-201ENST00000268704 CAPSQ13938 189 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 SUPT20HL1Q3ZLR7 823 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 SH3TC2Q8TF17 1288 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 FAM161BQ96MY7 647 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 NIF3L1Q9GZT8 377 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.8■□□□□ 0.442e-7■■□□□ 14.5
SPG7-201ENST00000268704 CXorf49A8MYA2 514 aaPredicted RBP17.8■□□□□ 0.44
SPG7-201ENST00000268704 UGT1A9O60656 530 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 GNAT1P11488 350 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 NAMPTP43490 491 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 SLC34A1Q06495 639 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 BMPR2Q13873 1038 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 PPM1NQ8N819 430 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 SHKBP1Q8TBC3 707 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 TEKT4Q8WW24 435 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 STMN2Q93045 179 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 ALKBH8Q96BT7 664 aaKnown RBP17.8■□□□□ 0.44
SPG7-201ENST00000268704 SRPK1Q96SB4 655 aaKnown RBP17.8■□□□□ 0.44
SPG7-201ENST00000268704 TSC22D3Q99576 134 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 UGT1A7Q9HAW7 530 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 UGT1A10Q9HAW8 530 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 UGT1A8Q9HAW9 530 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 MTO1Q9Y2Z2 717 aaKnown RBP17.8■□□□□ 0.44
SPG7-201ENST00000268704 IQANK1A0A1B0GTG1 560 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 TRIM49D1C9J1S8 452 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 TOP3BO95985 862 aaKnown RBP17.8■□□□□ 0.44
SPG7-201ENST00000268704 LDHAP00338 332 aaKnown RBP17.8■□□□□ 0.44
SPG7-201ENST00000268704 PGM1P36871 562 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 CDH8P55286 799 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 ZC3H12AQ5D1E8 599 aaKnown RBP17.8■□□□□ 0.44
SPG7-201ENST00000268704 POLNQ7Z5Q5 900 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 FAM83AQ86UY5 434 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 SLC44A1Q8WWI5 657 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 SLC13A1Q9BZW2 595 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 CNTN3Q9P232 1028 aa17.8■□□□□ 0.44
SPG7-201ENST00000268704 CPSF2Q9P2I0 782 aaKnown RBP17.8■□□□□ 0.44
SPG7-201ENST00000268704 RPL26L1Q9UNX3 145 aaKnown RBP17.8■□□□□ 0.44
SPG7-201ENST00000268704 PSME4Q14997 1843 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 HNRNPCL1O60812 293 aaKnown RBP17.79■□□□□ 0.44
SPG7-201ENST00000268704 DKC1O60832 514 aaKnown RBP eCLIP17.79■□□□□ 0.445e-6■□□□□ 9.1
SPG7-201ENST00000268704 RARBP10826 455 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 KDSRQ06136 332 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 CMPK2Q5EBM0 449 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 NSUN6Q8TEA1 469 aaKnown RBP17.79■□□□□ 0.44
SPG7-201ENST00000268704 SLC7A3Q8WY07 619 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 DHX33Q9H6R0 707 aaKnown RBP17.79■□□□□ 0.44
SPG7-201ENST00000268704 STRIP2Q9ULQ0 834 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 B2RBV5 119 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 DNAJC6O75061 913 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 PIGRP01833 764 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 OATP04181 439 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 ERBB2P04626 1255 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 MIPP30301 263 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 ARL2P36404 184 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 C11orf91Q3C1V1 193 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 CHSY1Q86X52 802 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 ARID3BQ8IVW6 561 aaPredicted RBP17.79■□□□□ 0.44
SPG7-201ENST00000268704 BRSK2Q8IWQ3 736 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 ACAP3Q96P50 834 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 SYNCQ9H7C4 482 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 ZNF302Q9NR11 478 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 KRT82Q9NSB4 513 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 LRCH1Q9Y2L9 728 aa17.79■□□□□ 0.44
SPG7-201ENST00000268704 MCF2LO15068 1137 aa17.78■□□□□ 0.44
SPG7-201ENST00000268704 KRT7P08729 469 aa17.78■□□□□ 0.44
SPG7-201ENST00000268704 EIF4BP23588 611 aaKnown RBP17.78■□□□□ 0.44
SPG7-201ENST00000268704 ASPAP45381 313 aa17.78■□□□□ 0.44
SPG7-201ENST00000268704 PPP1R2P3Q6NXS1 205 aa17.78■□□□□ 0.44
SPG7-201ENST00000268704 DARS2Q6PI48 645 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms