RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 CLDN5O00501 218 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 KRT7P08729 469 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 FLT3P36888 993 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 COILP38432 576 aaPredicted RBP21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 SLC8A3P57103 927 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 KLF1Q13351 362 aaPredicted RBP21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 TRADDQ15628 312 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 ODF2Q5BJF6 829 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 NOMO2Q5JPE7 1267 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 ANKS1BQ7Z6G8 1248 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 METTL23Q86XA0 190 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 DBF4BQ8NFT6 615 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 HASPINQ8TF76 798 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 KHSRPQ92945 711 aaKnown RBP eCLIP21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 HEMGNQ9BXL5 484 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 LRRC19Q9H756 370 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 TMEM161AQ9NX61 479 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 NFU1Q9UMS0 254 aa21.58■■□□□ 1.04
LYSMD2-201ENST00000267838 BRCA2P51587 3418 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 M0QZQ0 153 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 MYO1CO00159 1063 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 CYP11A1P05108 521 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 COL6A1P12109 1028 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 LCP1P13796 627 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 NPR3P17342 541 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 IL1R2P27930 398 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 PCSK1P29120 753 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 PTGIRP43119 386 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 FNTAP49354 379 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 COPS2P61201 443 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 PLCB3Q01970 1234 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 CUL1Q13616 776 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 TAF5Q15542 800 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 RSPH1Q8WYR4 309 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 TRIM51Q9BSJ1 452 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 RAB17Q9H0T7 212 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 ZWILCHQ9H900 591 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 FEZ2Q9UHY8 353 aaPredicted RBP21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 DSEQ9UL01 958 aa21.57■■□□□ 1.04
LYSMD2-201ENST00000267838 DPYSL4O14531 572 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 MIPP30301 263 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 PCK1P35558 622 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 SCNN1AP37088 669 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 DSC1Q08554 894 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 MFSD7Q6UXD7 560 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 SPOCD1Q6ZMY3 1216 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 PIGZQ86VD9 579 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 ZNF280BQ86YH2 543 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 JAMLQ86YT9 394 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 EIF1ADQ8N9N8 165 aaKnown RBP21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 C1orf54Q8WWF1 131 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 RIN2Q8WYP3 895 aaPredicted RBP21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 SEC14L1Q92503 715 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 RAPGEF5Q92565 580 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 SEPT8Q92599 483 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 ACSF2Q96CM8 615 aaPredicted RBP21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 RASSF4Q9H2L5 321 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 KANSL3Q9P2N6 904 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 RASAL2Q9UJF2 1139 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 MYBPHLA2RUH7 354 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 LRRD1A4D1F6 860 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 ENPP3O14638 875 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 DDHD2O94830 711 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 ITGB1P05556 798 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 PTPN7P35236 360 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 ATN1P54259 1190 aaPredicted RBP21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 CCDC14Q49A88 953 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 CLEC20AQ6ZU45 233 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 CCDC105Q8IYK2 499 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 CLEC4CQ8WTT0 213 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 SUSD3Q96L08 255 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 RTP3Q9BQQ7 232 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 ELAC1Q9H777 363 aaKnown RBP21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 USP18Q9UMW8 372 aa21.56■■□□□ 1.04
LYSMD2-201ENST00000267838 ARHGEF37A1IGU5 675 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 B4GALT3O60512 393 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 BEST1O76090 585 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 TRUB2O95900 331 aaKnown RBP21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 FAM200BP0CF97 657 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 KCTD19Q17RG1 926 aaPredicted RBP21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 C15orf59Q2T9L4 293 aaPredicted RBP21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 SMTNL2Q2TAL5 461 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 SH3PXD2AQ5TCZ1 1133 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 SLC39A5Q6ZMH5 540 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 FAM43BQ6ZT52 329 aaPredicted RBP21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 SLC26A9Q7LBE3 791 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 ANKRD33Q7Z3H0 272 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 DDX42Q86XP3 938 aaKnown RBP eCLIP21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 MYCBPAPQ8TBZ2 947 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 APBB2Q92870 758 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 PCED1BQ96HM7 432 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 CFAP57Q96MR6 1250 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 ERP44Q9BS26 406 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 DCLK3Q9C098 648 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 FAM107BQ9H098 131 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 CHST7Q9NS84 486 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 KRT82Q9NSB4 513 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 TBC1D13Q9NVG8 400 aa21.55■■□□□ 1.04
LYSMD2-201ENST00000267838 PCSK1NQ9UHG2 260 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms