RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TRIM49D1C9J1S8 452 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 LSM8O95777 96 aaKnown RBP17.65■□□□□ 0.42
RTN1-201ENST00000267484 ERBB2P04626 1255 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 ENO1P06733 434 aaKnown RBP17.65■□□□□ 0.42
RTN1-201ENST00000267484 NEK3P51956 506 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 CNTN2Q02246 1040 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 RNF220Q5VTB9 566 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 BRSK2Q8IWQ3 736 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 PHC3Q8NDX5 983 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 PPP1R12CQ9BZL4 782 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 STOML1Q9UBI4 398 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 GRAP2O75791 330 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 GJB1P08034 283 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 SERPINB4P48594 390 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 MAP3K10Q02779 954 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 KLC1Q07866 573 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 CDO1Q16878 200 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 FKBP1CQ5VVH2 108 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 TREML1Q86YW5 311 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 TEX9Q8N6V9 391 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 PDCD7Q8N8D1 485 aaKnown RBP17.64■□□□□ 0.41
RTN1-201ENST00000267484 PRPF31Q8WWY3 499 aaKnown RBP17.64■□□□□ 0.41
RTN1-201ENST00000267484 OXNAD1Q96HP4 312 aaPredicted RBP17.64■□□□□ 0.41
RTN1-201ENST00000267484 APOPT1Q96IL0 206 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 H3BRJ5 948 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 PPP1R12AO14974 1030 aaPredicted RBP17.64■□□□□ 0.41
RTN1-201ENST00000267484 ASPAP45381 313 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 IRX4P78413 519 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 CXCL9Q07325 125 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 HSF5Q4G112 596 aaPredicted RBP17.64■□□□□ 0.41
RTN1-201ENST00000267484 LRRC71Q8N4P6 559 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 NIPA2Q8N8Q9 360 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 SHKBP1Q8TBC3 707 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 ACAP3Q96P50 834 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 PEBP4Q96S96 227 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 SRPK1Q96SB4 655 aaKnown RBP17.64■□□□□ 0.41
RTN1-201ENST00000267484 ARHGEF4Q9NR80 690 aa17.64■□□□□ 0.41
RTN1-201ENST00000267484 SIGLEC16A6NMB1 481 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 SPATA31C2B4DYI2 1134 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 MCF2LO15068 1137 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 PSMG1O95456 288 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 PIGRP01833 764 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 ACADSP16219 412 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 VHLP40337 213 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 KDSRQ06136 332 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 SMAD1Q15797 465 aaKnown RBP17.63■□□□□ 0.41
RTN1-201ENST00000267484 ZNF398Q8TD17 642 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 FAM161BQ96MY7 647 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 TWNKQ96RR1 684 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 PDGFDQ9GZP0 370 aaPredicted RBP17.63■□□□□ 0.41
RTN1-201ENST00000267484 PPCSQ9HAB8 311 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 MYOZ2Q9NPC6 264 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 ZNF214Q9UL59 606 aaPredicted RBP17.63■□□□□ 0.41
RTN1-201ENST00000267484 IQANK1A0A1B0GTG1 560 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 MAFGO15525 162 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 FAM189A1O60320 539 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 KRT7P08729 469 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 DHRS4L1P0CG22 281 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 EIF4BP23588 611 aaKnown RBP17.63■□□□□ 0.41
RTN1-201ENST00000267484 HADHQ16836 314 aaKnown RBP17.63■□□□□ 0.41
RTN1-201ENST00000267484 CCDC62Q6P9F0 684 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 SH2D5Q6ZV89 423 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 EEPD1Q7L9B9 569 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 KBTBD2Q8IY47 623 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 SLC44A1Q8WWI5 657 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 FAF2Q96CS3 445 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.63■□□□□ 0.41
RTN1-201ENST00000267484 B2RBV5 119 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 ATG7O95352 703 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 NBPF12Q5TAG4 269 aaPredicted RBP17.63■□□□□ 0.41
RTN1-201ENST00000267484 LRRC74BQ6ZQY2 392 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 POLNQ7Z5Q5 900 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 ARID3BQ8IVW6 561 aaPredicted RBP17.63■□□□□ 0.41
RTN1-201ENST00000267484 TMEM192Q8IY95 271 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 RAB6BQ9NRW1 208 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 GPATCH2LQ9NWQ4 482 aa17.63■□□□□ 0.41
RTN1-201ENST00000267484 MAFBQ9Y5Q3 323 aaPredicted RBP17.63■□□□□ 0.41
RTN1-201ENST00000267484 RGPD3A6NKT7 1758 aaPredicted RBP17.62■□□□□ 0.41
RTN1-201ENST00000267484 RGPD4Q7Z3J3 1758 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 H7C0C1 242 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 PGM1P36871 562 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 ATP5OP48047 213 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 C15orf59Q2T9L4 293 aaPredicted RBP17.62■□□□□ 0.41
RTN1-201ENST00000267484 ZCCHC23Q6ZST2 131 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 WDR49Q8IV35 697 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 PIWIL1Q96J94 861 aaKnown RBP17.62■□□□□ 0.41
RTN1-201ENST00000267484 IQCGQ9H095 443 aaKnown RBP17.62■□□□□ 0.41
RTN1-201ENST00000267484 PPARGC1AQ9UBK2 798 aaKnown RBP17.62■□□□□ 0.41
RTN1-201ENST00000267484 MTO1Q9Y2Z2 717 aaKnown RBP17.62■□□□□ 0.41
RTN1-201ENST00000267484 COPEO14579 308 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 ADCY3O60266 1144 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 SMIM24O75264 130 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 CDH6P55285 790 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 DUOXA2Q1HG44 320 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 SGSM1Q2NKQ1 1148 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 XYLT1Q86Y38 959 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 SLC25A41Q8N5S1 370 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 ALKBH8Q96BT7 664 aaKnown RBP17.62■□□□□ 0.41
RTN1-201ENST00000267484 FAM136AQ96C01 138 aa17.62■□□□□ 0.41
RTN1-201ENST00000267484 PCYT2Q99447 389 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms