RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 STK38LQ9Y2H1 464 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 CEP83Q9Y592 693 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 TM9SF1O15321 606 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 MED7O43513 233 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 ARIH2O95376 493 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 MIPP30301 263 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 PCK1P35558 622 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 RAP1GAPP47736 663 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 NEK3P51956 506 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 CDH8P55286 799 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 SLC8A3P57103 927 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 LACTBP83111 547 aaPredicted RBP13.02□□□□□ -0.33
BEST3-201ENST00000266661 SLC18A2Q05940 514 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 DPYSL3Q14195 570 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 NOMO1Q15155 1222 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 TRNP1Q6NT89 227 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 RHPN2Q8IUC4 686 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 ZBTB8OSQ8IWT0 167 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 TMEM192Q8IY95 271 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 C1orf127Q8N9H9 656 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 TCP10LQ8TDR4 215 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 HHIPL1Q96JK4 782 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 FGD4Q96M96 766 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 RAB3IPQ96QF0 476 aaPredicted RBP13.02□□□□□ -0.33
BEST3-201ENST00000266661 PEBP4Q96S96 227 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 ADAM33Q9BZ11 813 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 VRTNQ9H8Y1 702 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 METTL5Q9NRN9 209 aaKnown RBP13.02□□□□□ -0.33
BEST3-201ENST00000266661 SLC5A4Q9NY91 659 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 LNPEPQ9UIQ6 1025 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 HAO1Q9UJM8 370 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.33
BEST3-201ENST00000266661 HGSO14964 777 aaPredicted RBP13.01□□□□□ -0.33
BEST3-201ENST00000266661 B4GALT5O43286 388 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 PEX11AO75192 247 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 CILPO75339 1184 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 TNNC2P02585 160 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 GM2AP17900 193 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 IBSPP21815 317 aaPredicted RBP13.01□□□□□ -0.33
BEST3-201ENST00000266661 TARSP26639 723 aaKnown RBP13.01□□□□□ -0.33
BEST3-201ENST00000266661 ALDH3A1P30838 453 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 GPD2P43304 727 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 PPIL2Q13356 520 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 KCNJ11Q14654 390 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 LY6KQ17RY6 165 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 TREML2Q5T2D2 321 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 ATF7IP2Q5U623 682 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 PLPPR4Q7Z2D5 763 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 CHSY1Q86X52 802 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 VSIG1Q86XK7 387 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 TMEM130Q8N3G9 435 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 LRRC71Q8N4P6 559 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 FAM13CQ8NE31 585 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 BRI3BPQ8WY22 251 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 PTPRN2Q92932 1015 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 MRRFQ96E11 262 aaKnown RBP13.01□□□□□ -0.33
BEST3-201ENST00000266661 ANKRD36BP1Q96IX9 119 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 CDT1Q9H211 546 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 PNPLA8Q9NP80 782 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 SAR1AQ9NR31 198 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 CNTN3Q9P232 1028 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 SLC17A7Q9P2U7 560 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 HMGXB4Q9UGU5 601 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 XPO7Q9UIA9 1087 aaKnown RBP13.01□□□□□ -0.33
BEST3-201ENST00000266661 RPL26L1Q9UNX3 145 aaKnown RBP13.01□□□□□ -0.33
BEST3-201ENST00000266661 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.01□□□□□ -0.33
BEST3-201ENST00000266661 TNFSF13BQ9Y275 285 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 TEX264Q9Y6I9 313 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 MGAMO43451 1857 aa13.01□□□□□ -0.33
BEST3-201ENST00000266661 PIAS1O75925 651 aa13□□□□□ -0.33
BEST3-201ENST00000266661 MICAL2O94851 1124 aa13□□□□□ -0.33
BEST3-201ENST00000266661 IL18RAPO95256 599 aa13□□□□□ -0.33
BEST3-201ENST00000266661 IL1BP01584 269 aa13□□□□□ -0.33
BEST3-201ENST00000266661 EIF3EP60228 445 aaKnown RBP13□□□□□ -0.33
BEST3-201ENST00000266661 MBTD1Q05BQ5 628 aa13□□□□□ -0.33
BEST3-201ENST00000266661 PTPN11Q06124 597 aaPredicted RBP13□□□□□ -0.33
BEST3-201ENST00000266661 NLRP9Q7RTR0 991 aa13□□□□□ -0.33
BEST3-201ENST00000266661 EXOC8Q8IYI6 725 aa13□□□□□ -0.33
BEST3-201ENST00000266661 FAM71DQ8N9W8 422 aa13□□□□□ -0.33
BEST3-201ENST00000266661 SH3TC2Q8TF17 1288 aa13□□□□□ -0.33
BEST3-201ENST00000266661 SLC44A1Q8WWI5 657 aa13□□□□□ -0.33
BEST3-201ENST00000266661 RSAD2Q8WXG1 361 aa13□□□□□ -0.33
BEST3-201ENST00000266661 TBC1D10AQ9BXI6 508 aa13□□□□□ -0.33
BEST3-201ENST00000266661 R3HDMLQ9H3Y0 253 aa13□□□□□ -0.33
BEST3-201ENST00000266661 KCNK13Q9HB14 408 aa13□□□□□ -0.33
BEST3-201ENST00000266661 PLAC1Q9HBJ0 212 aa13□□□□□ -0.33
BEST3-201ENST00000266661 USP29Q9HBJ7 922 aa13□□□□□ -0.33
BEST3-201ENST00000266661 NXF1Q9UBU9 619 aaKnown RBP13□□□□□ -0.33
BEST3-201ENST00000266661 NKX1-2Q9UD57 310 aaPredicted RBP13□□□□□ -0.33
BEST3-201ENST00000266661 CCL15-CCL14A0A0B4J2E2 113 aa12.99□□□□□ -0.33
BEST3-201ENST00000266661 GPR25O00155 361 aa12.99□□□□□ -0.33
BEST3-201ENST00000266661 DIAPH2O60879 1101 aa12.99□□□□□ -0.33
BEST3-201ENST00000266661 RPSAP08865 295 aaKnown RBP12.99□□□□□ -0.33
BEST3-201ENST00000266661 IQCF3P0C7M6 154 aa12.99□□□□□ -0.33
BEST3-201ENST00000266661 RBP3P10745 1247 aa12.99□□□□□ -0.33
BEST3-201ENST00000266661 CD19P15391 556 aa12.99□□□□□ -0.33
BEST3-201ENST00000266661 STIP1P31948 543 aaKnown RBP12.99□□□□□ -0.33
BEST3-201ENST00000266661 NRLP54845 237 aa12.99□□□□□ -0.33
BEST3-201ENST00000266661 ATP11AP98196 1134 aa12.99□□□□□ -0.33
BEST3-201ENST00000266661 RNASELQ05823 741 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms