RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 LRCH4O75427 683 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 ERLIN1O75477 346 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 BEST1O76090 585 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 TCF4P15884 667 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 PDGFRAP16234 1089 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 CAPN2P17655 700 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 SDC4P31431 198 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 FLT3P36888 993 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 CETN2P41208 172 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 RPL34P49207 117 aaKnown RBP8.71□□□□□ -1.01
COPS4-201ENST00000264389 ZNF143P52747 638 aaPredicted RBP8.71□□□□□ -1.01
COPS4-201ENST00000264389 MAP3K7CLP57077 242 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 VSNL1P62760 191 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 RBM10P98175 930 aaKnown RBP8.71□□□□□ -1.01
COPS4-201ENST00000264389 ACAP1Q15027 740 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 BRD3Q15059 726 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 PPP2R5EQ16537 467 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 CDO1Q16878 200 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 LRRC38Q5VT99 294 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 WDR93Q6P2C0 686 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 PAQR9Q6ZVX9 377 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 SLC26A9Q7LBE3 791 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 POLNQ7Z5Q5 900 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 OR10T2Q8NGX3 314 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 EXD1Q8NHP7 514 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 CLEC4CQ8WTT0 213 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 MAIP1Q8WWC4 291 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 RXFP2Q8WXD0 754 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 KCTD13Q8WZ19 329 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 TMEM175Q9BSA9 504 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 COLEC11Q9BWP8 271 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 DDX47Q9H0S4 455 aaKnown RBP8.71□□□□□ -1.01
COPS4-201ENST00000264389 SLITRK6Q9H5Y7 841 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 KLHL11Q9NVR0 708 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 STIM2Q9P246 746 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 RAB21Q9UL25 225 aa8.71□□□□□ -1.01
COPS4-201ENST00000264389 SF3B1O75533 1304 aaKnown RBP eCLIP8.71□□□□□ -1.01
COPS4-201ENST00000264389 COL4A4P53420 1690 aaPredicted RBP8.71□□□□□ -1.02
COPS4-201ENST00000264389 SYN3O14994 580 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 RAD51CO43502 376 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 PHF2O75151 1096 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 DAB1O75553 588 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 HEXIM1O94992 359 aaKnown RBP8.71□□□□□ -1.02
COPS4-201ENST00000264389 UPP2O95045 317 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 KRT7P08729 469 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 SLC11A1P49279 550 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 CLCN6P51797 869 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 CDR1P51861 262 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 SLC25A11Q02978 314 aaKnown RBP8.71□□□□□ -1.02
COPS4-201ENST00000264389 C15orf59Q2T9L4 293 aaPredicted RBP8.71□□□□□ -1.02
COPS4-201ENST00000264389 EFHC1Q5JVL4 640 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 ZNF280DQ6N043 979 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 TRNP1Q6NT89 227 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 FAM171BQ6P995 826 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 TMCO3Q6UWJ1 677 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.71□□□□□ -1.027e-13■■■■■ 35.8
COPS4-201ENST00000264389 C4orf50Q6ZRC1 276 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 SPATA2LQ8IUW3 424 aaPredicted RBP8.71□□□□□ -1.02
COPS4-201ENST00000264389 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 FAM149B1Q96BN6 582 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 CFAP57Q96MR6 1250 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 TMEM209Q96SK2 561 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 CNPY3Q9BT09 278 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 ZWILCHQ9H900 591 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 DMAP1Q9NPF5 467 aaPredicted RBP8.71□□□□□ -1.02
COPS4-201ENST00000264389 MARCH5Q9NX47 278 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 HCSTQ9UBK5 93 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 FAN1Q9Y2M0 1017 aa8.71□□□□□ -1.02
COPS4-201ENST00000264389 LRRD1A4D1F6 860 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 PI4K2BG5E9Z4 385 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 SART1O43290 800 aaKnown RBP8.7□□□□□ -1.02
COPS4-201ENST00000264389 HSF2BPO75031 334 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 GABBR2O75899 941 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 FBXO21O94952 628 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 ZRANB2O95218 330 aaKnown RBP eCLIP8.7□□□□□ -1.02
COPS4-201ENST00000264389 TIMP1P01033 207 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 AMHP03971 560 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 ALDH2P05091 517 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 RAG1P15918 1043 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 MIPP30301 263 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 PCK1P35558 622 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 TKTL1P51854 596 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 CACNA2D1P54289 1103 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 MRPS25P82663 173 aaKnown RBP8.7□□□□□ -1.02
COPS4-201ENST00000264389 ATP11AP98196 1134 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 SLC7A5Q01650 507 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 ELAVL2Q12926 359 aaKnown RBP8.7□□□□□ -1.02
COPS4-201ENST00000264389 TAF5Q15542 800 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 SMTNL2Q2TAL5 461 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 VARS2Q5ST30 1063 aaKnown RBP8.7□□□□□ -1.02
COPS4-201ENST00000264389 TXNRD3NBQ6F5E7 133 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 FUT10Q6P4F1 479 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 RCOR2Q8IZ40 523 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 DCP1BQ8IZD4 617 aaKnown RBP8.7□□□□□ -1.02
COPS4-201ENST00000264389 CRIPAKQ8N1N5 446 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 ZMIZ2Q8NF64 920 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 CCDC26Q8TAB7 109 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 FAM172AQ8WUF8 416 aa8.7□□□□□ -1.02
COPS4-201ENST00000264389 ACSF2Q96CM8 615 aaPredicted RBP8.7□□□□□ -1.02
COPS4-201ENST00000264389 SLITRK1Q96PX8 696 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms