RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 ART4Q93070 314 aa13.09□□□□□ -0.31
HERC6-201ENST00000264346 PGM2Q96G03 612 aa13.09□□□□□ -0.31
HERC6-201ENST00000264346 MROH8Q9H579 483 aa13.09□□□□□ -0.31
HERC6-201ENST00000264346 HAO1Q9UJM8 370 aa13.09□□□□□ -0.31
HERC6-201ENST00000264346 ABT1Q9ULW3 272 aaKnown RBP13.09□□□□□ -0.31
HERC6-201ENST00000264346 ARF4P18085 180 aaPredicted RBP13.09□□□□□ -0.31
HERC6-201ENST00000264346 PTGIRP43119 386 aa13.09□□□□□ -0.31
HERC6-201ENST00000264346 HUNKP57058 714 aa13.09□□□□□ -0.31
HERC6-201ENST00000264346 GEMIN4P57678 1058 aaKnown RBP13.09□□□□□ -0.31
HERC6-201ENST00000264346 ZNF280AP59817 542 aaPredicted RBP13.09□□□□□ -0.31
HERC6-201ENST00000264346 SPRED3Q2MJR0 410 aa13.09□□□□□ -0.31
HERC6-201ENST00000264346 CES3Q6UWW8 571 aa13.09□□□□□ -0.31
HERC6-201ENST00000264346 ZNF572Q7Z3I7 529 aaPredicted RBP13.09□□□□□ -0.31
HERC6-201ENST00000264346 GPR20Q99678 358 aa13.09□□□□□ -0.31
HERC6-201ENST00000264346 NTPCRQ9BSD7 190 aaKnown RBP13.09□□□□□ -0.31
HERC6-201ENST00000264346 CNPY3Q9BT09 278 aa13.09□□□□□ -0.31
HERC6-201ENST00000264346 ST6GALNAC4Q9H4F1 302 aa13.09□□□□□ -0.31
HERC6-201ENST00000264346 RPTORQ8N122 1335 aa13.08□□□□□ -0.31
HERC6-201ENST00000264346 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.08□□□□□ -0.31
HERC6-201ENST00000264346 ACO1P21399 889 aaKnown RBP13.08□□□□□ -0.31
HERC6-201ENST00000264346 ZC3H12AQ5D1E8 599 aaKnown RBP13.08□□□□□ -0.31
HERC6-201ENST00000264346 UBAP2Q5T6F2 1119 aaKnown RBP13.08□□□□□ -0.31
HERC6-201ENST00000264346 THEMIS2Q5TEJ8 643 aa13.08□□□□□ -0.31
HERC6-201ENST00000264346 RSPH3Q86UC2 560 aa13.08□□□□□ -0.31
HERC6-201ENST00000264346 NDUFAF2Q8N183 169 aa13.08□□□□□ -0.31
HERC6-201ENST00000264346 GLIS1Q8NBF1 620 aa13.08□□□□□ -0.31
HERC6-201ENST00000264346 DTX3LQ8TDB6 740 aa13.08□□□□□ -0.31
HERC6-201ENST00000264346 FAM193BQ96PV7 902 aaPredicted RBP13.08□□□□□ -0.31
HERC6-201ENST00000264346 UBP1Q9NZI7 540 aa13.08□□□□□ -0.31
HERC6-201ENST00000264346 TMEM59LQ9UK28 342 aa13.08□□□□□ -0.31
HERC6-201ENST00000264346 SNCAIPQ9Y6H5 919 aa13.08□□□□□ -0.31
HERC6-201ENST00000264346 GRIN2DO15399 1336 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 MYPNQ86TC9 1320 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 M0QYT0 321 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 LIASO43766 372 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 GAS2O43903 313 aaKnown RBP13.08□□□□□ -0.32
HERC6-201ENST00000264346 HAUS5O94927 633 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 LSM8O95777 96 aaKnown RBP13.08□□□□□ -0.32
HERC6-201ENST00000264346 TYK2P29597 1187 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 CRADDP78560 199 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 CNGA2Q16280 664 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 EFHC2Q5JST6 749 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 GBP7Q8N8V2 638 aaPredicted RBP13.08□□□□□ -0.32
HERC6-201ENST00000264346 LENG1Q96BZ8 264 aaPredicted RBP13.08□□□□□ -0.32
HERC6-201ENST00000264346 VCPIP1Q96JH7 1222 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 TSSK1BQ9BXA7 367 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 MINDY3Q9H8M7 445 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 CYP4F11Q9HBI6 524 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 GOLGA2P5Q9HBQ8 144 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 TXNRD2Q9NNW7 524 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 STAP1Q9ULZ2 295 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 SLX4Q8IY92 1834 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 DNM1LO00429 736 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 DCTN3O75935 186 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 HMGCRP04035 888 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 KDELR1P24390 212 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 ARL2P36404 184 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 ERMARDQ5T6L9 678 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 NOTUMQ6P988 496 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 MON1BQ7L1V2 547 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 UNC45BQ8IWX7 931 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 RYBPQ8N488 228 aaPredicted RBP13.08□□□□□ -0.32
HERC6-201ENST00000264346 SPOCK2Q92563 424 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 DDX27Q96GQ7 796 aaKnown RBP13.08□□□□□ -0.32
HERC6-201ENST00000264346 TMEM134Q9H6X4 195 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 ZFATQ9P243 1243 aa13.08□□□□□ -0.32
HERC6-201ENST00000264346 MAFBQ9Y5Q3 323 aaPredicted RBP13.08□□□□□ -0.32
HERC6-201ENST00000264346 EME2A4GXA9 379 aaPredicted RBP13.07□□□□□ -0.32
HERC6-201ENST00000264346 TMEM191CA6NGB0 347 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 CCDC160A6NGH7 325 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 KCNK1O00180 336 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 PPP1R12AO14974 1030 aaPredicted RBP13.07□□□□□ -0.32
HERC6-201ENST00000264346 PYGBP11216 843 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 ATP4AP20648 1035 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 KCNA3P22001 575 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 RBL1P28749 1068 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 EPHB1P54762 984 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 DEUP1Q05D60 604 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 EFTUD2Q15029 972 aaKnown RBP eCLIP13.07□□□□□ -0.32
HERC6-201ENST00000264346 ZNF484Q5JVG2 852 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 IL31Q6EBC2 164 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 TAS1R3Q7RTX0 852 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 RNF135Q8IUD6 432 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 CRLF3Q8IUI8 442 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 FUKQ8N0W3 1084 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 NDRG1Q92597 394 aaKnown RBP13.07□□□□□ -0.32
HERC6-201ENST00000264346 EXT2Q93063 718 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 CCDC124Q96CT7 223 aaKnown RBP13.07□□□□□ -0.32
HERC6-201ENST00000264346 TNIP3Q96KP6 325 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 LPIN3Q9BQK8 851 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 HMGXB4Q9UGU5 601 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 BARX2Q9UMQ3 279 aaPredicted RBP13.07□□□□□ -0.32
HERC6-201ENST00000264346 COQ4Q9Y3A0 265 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 KBTBD13C9JR72 458 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 DFFAO00273 331 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 USP12O75317 370 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 UNGP13051 313 aaPredicted RBP13.07□□□□□ -0.32
HERC6-201ENST00000264346 NCAM1P13591 858 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 AMPD1P23109 780 aa13.07□□□□□ -0.32
HERC6-201ENST00000264346 ADRA1DP25100 572 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms