RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 PSEN1P49768 467 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 BASP1P80723 227 aaKnown RBP8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 ADCY1Q08828 1119 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 LHX8Q68G74 356 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 HEATR6Q6AI08 1181 aaKnown RBP8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 PALM2Q8IXS6 379 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 C12orf29Q8N999 325 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 ARMC5Q96C12 935 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.65□□□□□ -1.022e-6■□□□□ 10.7
GTF3C3-201ENST00000263956 PACSIN1Q9BY11 444 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 CERS4Q9HA82 394 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 ASAH2Q9NR71 780 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 STXBP5LQ9Y2K9 1186 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 DYNC1I1O14576 645 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 OPA1O60313 960 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 USP17L7P0C7H9 530 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 RBM10P98175 930 aaKnown RBP8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 DUSP4Q13115 394 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 GLIPR1L2Q4G1C9 344 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 LCLAT1Q6UWP7 414 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 DNAAF3Q8N9W5 541 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 C3orf20Q8ND61 904 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 SUSD3Q96L08 255 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 SERPINB11Q96P15 392 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 RPRD1AQ96P16 312 aaPredicted RBP8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 FAM114A2Q9NRY5 505 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 ABCC13Q9NSE7 274 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 KLHL11Q9NVR0 708 aa8.65□□□□□ -1.02
GTF3C3-201ENST00000263956 TCHHQ07283 1943 aa8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 F5H5T6 163 aa8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 CLDN5O00501 218 aa8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 XPO1O14980 1071 aaKnown RBP8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 VNN1O95497 513 aa8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 CCR1P32246 355 aa8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 GUCY2DQ02846 1103 aa8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 GPM6BQ13491 265 aa8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 CRELD2Q6UXH1 353 aaPredicted RBP8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 SLFN11Q7Z7L1 901 aa8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 RBM23Q86U06 439 aaKnown RBP8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 DEFB106AQ8N104 65 aa8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 ATAD1Q8NBU5 361 aa8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 SMG8Q8ND04 991 aaKnown RBP8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 POPDC2Q9HBU9 364 aa8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 APOBEC3GQ9HC16 384 aaKnown RBP8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 PPANQ9NQ55 473 aaKnown RBP8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 PAK6Q9NQU5 681 aaPredicted RBP8.65□□□□□ -1.03
GTF3C3-201ENST00000263956 C9IYK1 514 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 CALCAP01258 141 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 EPHB2P29323 1055 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 PBX1P40424 430 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 SLC11A1P49279 550 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 TBX4P57082 545 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 ST8SIA6P61647 398 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 DR1Q01658 176 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 UAP1Q16222 522 aaPredicted RBP8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 ACCSLQ4AC99 568 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 RABGAP1LQ5R372 815 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 FAM131BQ86XD5 332 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 SPATA18Q8TC71 538 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 TCF25Q9BQ70 676 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 CORO1BQ9BR76 489 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 IRX2Q9BZI1 471 aaPredicted RBP8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 VPS37BQ9H9H4 285 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 GRID2IPA4D2P6 1211 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 DFFAO00273 331 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 PFDN6O15212 129 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 OR4Q2P0C623 313 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 TKTP29401 623 aaKnown RBP8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 HNRNPH3P31942 346 aaKnown RBP8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 PBX3P40426 434 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 NDUFV1P49821 464 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 FMO1Q01740 532 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 ROR1Q01973 937 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 HECTD3Q5T447 861 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 HERC6Q8IVU3 1022 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 GANCQ8TET4 914 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 STRA6Q9BX79 667 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 OSBPL8Q9BZF1 889 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 KLC2Q9H0B6 622 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 LHX5Q9H2C1 402 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 NRDE2Q9H7Z3 1164 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 IPO11Q9UI26 975 aaKnown RBP8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 ANAPC5Q9UJX4 755 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 SNX12Q9UMY4 172 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 MRPS23Q9Y3D9 190 aaKnown RBP8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 MAD1L1Q9Y6D9 718 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 O00370 1275 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 ZNF197O14709 1029 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 PSTPIP1O43586 416 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 ATP1A1P05023 1023 aaKnown RBP8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 LRPAP1P30533 357 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 NOS2P35228 1153 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 ATP5C1P36542 298 aaKnown RBP8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 IFNAR2P48551 515 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 RAD23BP54727 409 aa8.64□□□□□ -1.03
GTF3C3-201ENST00000263956 ITIH3Q06033 890 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms